RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TSPY1Q01534 308 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 RUNX1T1Q06455 604 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SPAG1Q07617 926 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 BFSP1Q12934 665 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 MAD2L1Q13257 205 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SNTA1Q13424 505 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SLC39A14Q15043 492 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 KARSQ15046 597 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 ZRSR1Q15695 479 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SYT16Q17RD7 645 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 ZC2HC1CQ53FD0 456 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 KRTCAP3Q53RY4 240 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SPDYCQ5MJ68 293 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 STXBP5Q5T5C0 1151 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 TRNP1Q6NT89 227 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 PRSS57Q6UWY2 283 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 CCDC73Q6ZRK6 1079 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 STXBP4Q6ZWJ1 553 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 Q75L30 129 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SDCCAG8Q86SQ7 713 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SFR1Q86XK3 245 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 EPHX4Q8IUS5 362 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 C12orf56Q8IXR9 622 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 EFCAB13Q8IY85 973 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 PDCL2Q8N4E4 241 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 MRPS31Q92665 395 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 MTBPQ96DY7 904 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 EPSTI1Q96J88 318 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 PLIN2Q99541 437 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 GFI1Q99684 422 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HPS4Q9NQG7 708 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 TXLNGQ9NUQ3 528 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HAUS2Q9NVX0 235 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 TBC1D7Q9P0N9 293 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 GCNT4Q9P109 453 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 CGNQ9P2M7 1197 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 FBXO2Q9UK22 296 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 CDH9Q9ULB4 789 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 CMAHPQ9Y471 501 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 LOXL2Q9Y4K0 774 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 NUP210Q8TEM1 1887 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 GPR179Q6PRD1 2367 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 TMEM8BA6NDV4 472 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF233A6NK53 670 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ANKRD28O15084 1053 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 KRT86O43790 486 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 MITFO75030 526 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 TPPPO94811 219 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 OLFM2O95897 454 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 PORP16435 677 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 SYT1P21579 422 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 WARSP23381 471 aaKnown RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 MT3P25713 68 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 CORO1AP31146 461 aaKnown RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ACSL1P33121 698 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 SLC7A9P82251 487 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 KRT81Q14533 505 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 PON2Q15165 354 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 SF3B4Q15427 424 aaKnown RBP eCLIP4.52□□□□□ -1.694e-8■■■■□ 21.1
CSDE1-212ENST00000529046 ZNF77Q15935 545 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 MYLK3Q32MK0 819 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 Q6ZS52 159 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 WDR49Q8IV35 697 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 CCDC65Q8IXS2 484 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 GPD1LQ8N335 351 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 CSGALNACT2Q8N6G5 542 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 MAB21L3Q8N8X9 362 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ACVR1CQ8NER5 493 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 OTUB2Q96DC9 234 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ANKRD36BP1Q96IX9 119 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 DUX5Q96PT3 197 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 P2RY13Q9BPV8 354 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 FAM213AQ9BRX8 229 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 CCDC68Q9H2F9 335 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 TNMDQ9H2S6 317 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 ECT2Q9H8V3 914 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 MAGEF1Q9HAY2 307 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 PANK4Q9NVE7 773 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 COMMD8Q9NX08 183 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 DDX43Q9NXZ2 648 aaKnown RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 RBAKQ9NYW8 714 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 IL37Q9NZH6 218 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 GTF3C4Q9UKN8 822 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 CCL26Q9Y258 94 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 AMDHD2Q9Y303 409 aa4.52□□□□□ -1.69
CSDE1-212ENST00000529046 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 KIF26AQ9ULI4 1882 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-212ENST00000529046 UBE4BO95155 1302 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 MYH11P35749 1972 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TRAV19A0A0A6YYK7 116 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 PVALEFA0A1B0GWK0 134 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 FAM92AA1XBS5 289 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CTAGE9A4FU28 777 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF840PA6NDX5 716 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TULP2O00295 520 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SLC9A3R1O14745 358 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-212ENST00000529046 GJB3O75712 270 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms