RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 NDC1Q9BTX1 674 aa15.84■□□□□ 0.13
SMCO4-204ENST00000527149 GATA5Q9BWX5 397 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-204ENST00000527149 LHX9Q9NQ69 397 aa15.84■□□□□ 0.13
SMCO4-204ENST00000527149 SLC22A11Q9NSA0 550 aa15.84■□□□□ 0.13
SMCO4-204ENST00000527149 RAXQ9Y2V3 346 aa15.84■□□□□ 0.13
SMCO4-204ENST00000527149 SCN3AQ9NY46 2000 aa15.84■□□□□ 0.13
SMCO4-204ENST00000527149 TMEM120BA0PK00 339 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 UBFD1O14562 309 aaKnown RBP15.83■□□□□ 0.12
SMCO4-204ENST00000527149 FOXS1O43638 330 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 TRIM13O60858 407 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CLEC3AO75596 197 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 ZWINTO95229 277 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CLDN9O95484 217 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 SERPINA6P08185 405 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 HNRNPH1P31943 449 aaKnown RBP15.83■□□□□ 0.12
SMCO4-204ENST00000527149 SLC18A1P54219 525 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 ARSFP54793 590 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 MUM1Q2TAK8 710 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 ADPRMQ3LIE5 342 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 MANEAQ5SRI9 462 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 C1orf189Q5VU69 101 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CES4AQ5XG92 561 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 MED27Q6P2C8 311 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 TTLL10Q6ZVT0 673 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 COX15Q7KZN9 410 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 SYVN1Q86TM6 617 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CACNA2D3Q8IZS8 1091 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CCNYL1Q8N7R7 359 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 TRPV3Q8NET8 790 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 WDR20Q8TBZ3 569 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 AGAP11Q8TF27 550 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 ZNF473Q8WTR7 871 aaKnown RBP15.83■□□□□ 0.12
SMCO4-204ENST00000527149 KCNE4Q8WWG9 221 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CLIP3Q96DZ5 547 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 PKNOX2Q96KN3 472 aa15.83■□□□□ 0.12
SMCO4-204ENST00000527149 CCDC88CQ9P219 2028 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 LOC101059948A0A1B0GTJ6 334 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 MLYCDO95822 493 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 ARRB2P32121 409 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 WDR4P57081 412 aaKnown RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 ABHD18Q0P651 414 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 SRSF6Q13247 344 aaKnown RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 FAM53BQ14153 422 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 ZRSR2Q15696 482 aaKnown RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 RBBP7Q16576 425 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 CPSF6Q16630 551 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 FAM214AQ32MH5 1076 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 ATG14Q6ZNE5 492 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 PRSS41Q7RTY9 318 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 PDSS2Q86YH6 399 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 MYLK4Q86YV6 388 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 RNF175Q8N4F7 328 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 METTL27Q8N6F8 245 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 PPP4R1Q8TF05 950 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 CT55Q8WUE5 264 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 UBE2E3Q969T4 207 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 MVB12AQ96EY5 273 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 DPH2Q9BQC3 489 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-204ENST00000527149 MS4A8Q9BY19 250 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 NLNQ9BYT8 704 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 DRC3Q9H069 523 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 CHST8Q9H2A9 424 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 TNFRSF12AQ9NP84 129 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 DMRT3Q9NQL9 472 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 TXLNGQ9NUQ3 528 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 TRPS1Q9UHF7 1281 aa15.82■□□□□ 0.12
SMCO4-204ENST00000527149 LRIT2A6NDA9 550 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 OR4F21O95013 312 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 SMIM10L1P0DMW3 83 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 WT1P19544 449 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-204ENST00000527149 F8A1P23610 371 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 PKNOX1P55347 436 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 NAA20P61599 178 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 RGS1Q08116 209 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 NKAIN1Q4KMZ8 207 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 FAM199XQ6PEV8 388 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-204ENST00000527149 ZCCHC23Q6ZST2 131 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 GPRIN3Q6ZVF9 776 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 VASH2Q86V25 355 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 SPACA3Q8IXA5 215 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 AMER3Q8N944 861 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 HUS1BQ8NHY5 278 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 ZCCHC10Q8TBK6 192 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-204ENST00000527149 SMIM10Q96HG1 83 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 NAF1Q96HR8 494 aaKnown RBP15.81■□□□□ 0.12
SMCO4-204ENST00000527149 DPH1Q9BZG8 443 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 KLHL31Q9H511 634 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 KCNK9Q9NPC2 374 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 CROTQ9UKG9 612 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 PADI1Q9ULC6 663 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 STK38LQ9Y2H1 464 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 PCDHGA11Q9Y5H2 935 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 SLC22A7Q9Y694 548 aa15.81■□□□□ 0.12
SMCO4-204ENST00000527149 A0A087WV48 116 aa15.8■□□□□ 0.12
SMCO4-204ENST00000527149 ANKDD1BA6NHY2 528 aa15.8■□□□□ 0.12
SMCO4-204ENST00000527149 BIRC5O15392 142 aa15.8■□□□□ 0.12
SMCO4-204ENST00000527149 CNOT3O75175 753 aaKnown RBP15.8■□□□□ 0.12
SMCO4-204ENST00000527149 ESRRBO95718 433 aa15.8■□□□□ 0.12
SMCO4-204ENST00000527149 SERPIND1P05546 499 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms