RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 KLHL29Q96CT2 875 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ARHGEF26Q96DR7 871 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 POM121L2Q96KW2 1035 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SPATA17Q96L03 361 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ZSCAN31Q96LW9 406 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 FAM20AQ96MK3 541 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ADPGKQ9BRR6 497 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ZNF577Q9BSK1 485 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NUP58Q9BVL2 599 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TIPINQ9BVW5 301 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TRIM6Q9C030 488 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 ZMYND12Q9H0C1 365 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CXXC4Q9H2H0 198 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 BOLA2Q9H3K6 86 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 DCTPP1Q9H773 170 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SGK2Q9HBY8 427 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 NOD2Q9HC29 1040 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SH3GLB2Q9NR46 395 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ANKEF1Q9NU02 776 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 RBM28Q9NW13 759 aaKnown RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 FAM118AQ9NWS6 357 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 COMMD8Q9NX08 183 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 BARHL2Q9NY43 387 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 GTSE1Q9NYZ3 720 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 IL1RAPL1Q9NZN1 696 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SUCLA2Q9P2R7 463 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 ASIC3Q9UHC3 531 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 FBXL5Q9UKA1 691 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 ACSL5Q9ULC5 683 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 HSF4Q9ULV5 492 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SUFUQ9UMX1 484 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PRG3Q9Y2Y8 225 aaPredicted RBP1.51□□□□□ -2.17
CD44-212ENST00000524922 PCDHGB3Q9Y5G1 929 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 CSNK1G3Q9Y6M4 447 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 SCINQ9Y6U3 715 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 TLN2Q9Y4G6 2542 aa1.51□□□□□ -2.17
CD44-212ENST00000524922 PCNX3Q9H6A9 2034 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 PTPRBP23467 1997 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 ADAMTS9Q9P2N4 1935 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MYO5AQ9Y4I1 1855 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NEDD4P46934 1319 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TRAV19A0A0A6YYK7 116 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CCDC196A0A1B0GTZ2 297 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FAM92AA1XBS5 289 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MTMR11A4FU01 709 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 VPS37CA5D8V6 355 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 GAGE10A6NGK3 116 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 HHLA1C9JL84 531 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FAM90A26D6RGX4 464 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FAM86B1E9PN63 330 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 H0YCG3 227 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 PLK4O00444 970 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 SCAMP1O15126 338 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 EIF3DO15371 548 aaKnown RBP eCLIP1.5□□□□□ -2.17
CD44-212ENST00000524922 LATO43561 262 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 KLHL41O60662 606 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 SRSF10O75494 262 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 PSMD10O75832 226 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 B3GAT3O94766 335 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 PRAMEF12O95522 483 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FAM86B2P0C5J1 330 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ALPPL2P10696 532 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MCF2P10911 925 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ARF4P18085 180 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 GABRG2P18507 467 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 RBMS1P29558 406 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 CHRNB4P30926 498 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ARL2P36404 184 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 GNL1P36915 607 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NAMPTP43490 491 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 QARSP47897 775 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 IFNAR2P48551 515 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 DRG2P55039 364 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 ARL4CP56559 192 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TAS2R38P59533 333 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 RPL10AP62906 217 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NOP14P78316 857 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NTHL1P78549 312 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 YWHAHQ04917 246 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 LAMTOR4Q0VGL1 99 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TWF1Q12792 350 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TRDNQ13061 729 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TMEM187Q14656 261 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TEAD2Q15562 447 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MAPRE1Q15691 268 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 HIST2H2ACQ16777 129 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 PRICKLE4Q2TBC4 344 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 KRTAP13-3Q3SY46 172 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MPP7Q5T2T1 576 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 GGNBP1Q5YKI7 109 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 C18orf63Q68DL7 685 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 OR7E24Q6IFN5 339 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 NEK5Q6P3R8 708 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CASC1Q6TDU7 716 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 RBMS3Q6XE24 437 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 TMTC3Q6ZXV5 915 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 DNAJB7Q7Z6W7 309 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 TMEM150AQ86TG1 271 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 HAPLN4Q86UW8 402 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms