RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 SPATA7Q9P0W8 599 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 FEZ2Q9UHY8 353 aaPredicted RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 AAR2Q9Y312 384 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 HAT1O14929 419 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 RDH16O75452 317 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 ITGA10O75578 1167 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 CELA3AP09093 270 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 ERGP11308 486 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 NID1P14543 1247 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 PSMA3P25788 255 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 CDKN2BP42772 138 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 TFDP2Q14188 446 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 KRTAP24-1Q3LI83 254 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 NDUFAF5Q5TEU4 345 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 FAM109AQ8N4B1 249 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 OR1F2PQ96R84 312 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 DRG1Q9Y295 367 aaKnown RBP12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
NKX3-1-202ENST00000523261 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 CCDC162PA2VCL2 907 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 HACD1B0YJ81 288 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 ENDOUP21128 410 aaKnown RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 RPA3P35244 121 aaPredicted RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 CCNFP41002 786 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 MYL5Q02045 173 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 PRDX1Q06830 199 aaKnown RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 ICE2Q659A1 982 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 KIAA0930Q6ICG6 404 aaPredicted RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 TMEM214Q6NUQ4 689 aaKnown RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 MAATS1Q7Z4T9 603 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 CYP4X1Q8N118 509 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 KRT222Q8N1A0 295 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 SMPDL3AQ92484 453 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 P3H4Q92791 437 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 DACH2Q96NX9 599 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 UTP6Q9NYH9 597 aaKnown RBP12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 EML6Q6ZMW3 1958 aa12.87□□□□□ -0.35
NKX3-1-202ENST00000523261 G3V3Y1 287 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 TPH1P17752 444 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 IL10P22301 178 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 RBL1P28749 1068 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 ZNF136P52737 540 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 TRIM14Q14142 442 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 PRPSAP1Q14558 356 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 POU6F1Q14863 301 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 TMED2Q15363 201 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 NFKBIBQ15653 356 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 CCDC38Q502W7 563 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 GK5Q6ZS86 529 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 APCDD1LQ8NCL9 501 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 CCL19Q99731 98 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 MACROD1Q9BQ69 325 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 GSX2Q9BZM3 304 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 ANKHQ9HCJ1 492 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 ERVK-11Q9UQG0 969 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 R3HDM2Q9Y2K5 976 aaKnown RBP12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 BZW2Q9Y6E2 419 aaKnown RBP12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 DSCAMO60469 2012 aa12.86□□□□□ -0.35
NKX3-1-202ENST00000523261 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 ATP6AP2A0A1C7CYW4 349 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 HCN1O60741 890 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 ATP6AP2O75787 350 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 FHP07954 510 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 SSR4P51571 173 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 WNT3P56703 355 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 ADCK2Q7Z695 626 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 FBXW8Q8N3Y1 598 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms