RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PIK3R1P27986 724 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 OR1D5P58170 312 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 DHRS11Q6UWP2 260 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 KIF6Q6ZMV9 814 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 HOOK3Q86VS8 718 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 ANKRD46Q86W74 232 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 ZNF485Q8NCK3 441 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 KIAA0895Q8NCT3 520 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 UBLCP1Q8WVY7 318 aaPredicted RBP4.37□□□□□ -1.71
SKP1-208ENST00000521216 OMA1Q96E52 524 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 NSMCE3Q96MG7 304 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 IL12RB2Q99665 862 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 VGLL1Q99990 258 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 TRIM15Q9C019 465 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 DNAI2Q9GZS0 605 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 C3orf14Q9HBI5 128 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 EXOC1Q9NV70 894 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 BAIAP2L1Q9UHR4 511 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 LNPEPQ9UIQ6 1025 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 NOCTQ9UK39 431 aaKnown RBP4.37□□□□□ -1.71
SKP1-208ENST00000521216 RNF215Q9Y6U7 377 aa4.37□□□□□ -1.71
SKP1-208ENST00000521216 A0A087WZ39 114 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 GLTPD2A6NH11 291 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 KBTBD13C9JR72 458 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 PI4K2BG5E9Z4 385 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 DCXO43602 365 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 MT-ND2P03891 347 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 SUPT20HL2P0C7V6 817 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 PDHA2P29803 388 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 CCND3P30281 292 aaPredicted RBP4.36□□□□□ -1.71
SKP1-208ENST00000521216 HNF4AP41235 474 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 BTG1P62324 171 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 CETN1Q12798 172 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 MOGAT2Q3SYC2 334 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
SKP1-208ENST00000521216 MACC1Q6ZN28 852 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 GPR141Q7Z602 305 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 TUSC5Q8IXB3 177 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 CNRIP1Q96F85 164 aaPredicted RBP4.36□□□□□ -1.71
SKP1-208ENST00000521216 JAKMIP1Q96N16 626 aaKnown RBP4.36□□□□□ -1.71
SKP1-208ENST00000521216 TSSK2Q96PF2 358 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 WWTR1Q9GZV5 400 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 MTHFD2LQ9H903 347 aaPredicted RBP4.36□□□□□ -1.71
SKP1-208ENST00000521216 VPS18Q9P253 973 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 HBS1LQ9Y450 684 aaKnown RBP4.36□□□□□ -1.71
SKP1-208ENST00000521216 PCDHGA1Q9Y5H4 931 aa4.36□□□□□ -1.71
SKP1-208ENST00000521216 A0A1B0GU03 582 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 MAGEB2O15479 319 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 UGT1A4P22310 534 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 TNNT3P45378 269 aaPredicted RBP4.35□□□□□ -1.71
SKP1-208ENST00000521216 IRX4P78413 519 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
SKP1-208ENST00000521216 FASTKD3Q14CZ7 662 aaKnown RBP4.35□□□□□ -1.71
SKP1-208ENST00000521216 FAM106AQ4KMX7 169 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 CCDC158Q5M9N0 1113 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 DOK6Q6PKX4 331 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 FRRS1Q6ZNA5 592 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 COX8CQ7Z4L0 72 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 AQP11Q8NBQ7 271 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 ATAD1Q8NBU5 361 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 RPLP0P6Q8NHW5 317 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 ATP6V1E2Q96A05 226 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 ZNF689Q96CS4 500 aaPredicted RBP4.35□□□□□ -1.71
SKP1-208ENST00000521216 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 ANP32EQ9BTT0 268 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 CABLES2Q9BTV7 478 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 PRSS21Q9Y6M0 314 aa4.35□□□□□ -1.71
SKP1-208ENST00000521216 MEX3AA1L020 520 aaKnown RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 ANTXRLA6NF34 631 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 OOEPA6NGQ2 149 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 E9PQ18 207 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 NPIPB9F8W1W9 429 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 NTN3O00634 580 aaPredicted RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 IDH3BO43837 385 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 ACSL4O60488 711 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 TBX6O95947 436 aaPredicted RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 TMEM50BP56557 158 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 YWHAHQ04917 246 aaPredicted RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 LRRC37A5PQ49AS3 106 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 IQCCQ4KMZ1 466 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 TAF1BQ53T94 588 aaPredicted RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 FAAP20Q6NZ36 180 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 ZNF613Q6PF04 617 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 LCLAT1Q6UWP7 414 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 TRMT11Q7Z4G4 463 aaKnown RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 METTL4Q8N3J2 472 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 SMYD1Q8NB12 490 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 AFAP1L1Q8TED9 768 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 PKNOX2Q96KN3 472 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 AGAP4Q96P64 663 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 UTP14AQ9BVJ6 771 aaKnown RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 EGLN1Q9GZT9 426 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 C5orf66Q9H5L9 145 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 COPS7BQ9H9Q2 264 aaPredicted RBP4.34□□□□□ -1.71
SKP1-208ENST00000521216 CDH7Q9ULB5 785 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 SATB2Q9UPW6 733 aa4.34□□□□□ -1.71
SKP1-208ENST00000521216 NEDD4P46934 1319 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms