RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 BOLA2Q9H3K6 86 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRPV4Q9HBA0 871 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 Q9N2K0 584 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYNNQ9NPC7 610 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 CCDC177Q9NQR7 707 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 BATF3Q9NR55 127 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 WDR35Q9P2L0 1181 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 CACNG4Q9UBN1 327 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 ASB3Q9Y575 518 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 ECM29Q5VYK3 1845 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH1P12882 1939 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 PALLDQ8WX93 1383 aa2.97□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH7BA7E2Y1 1941 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CHD4Q14839 1912 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 MYH2Q9UKX2 1941 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ERICH2A1L162 156 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 GOLGA6L4A6NEF3 574 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 HHLA1C9JL84 531 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 PSMD14O00487 310 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CLDN4O14493 209 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 KLF11O14901 512 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPRY1O43609 319 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 STX10O60499 249 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CELF2O95319 508 aaKnown RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CTDNEP1O95476 244 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 YEATS4O95619 227 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 PCCAP05165 728 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 PATE4P0C8F1 98 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CFC1BP0CG36 223 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CFC1P0CG37 223 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM157CP0CG43 387 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SMIM18P0DKX4 95 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 IGHV4-31P0DP07 118 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SAGP10523 405 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 HSPD1P10809 573 aaKnown RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 HAPLN1P10915 354 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 FDPSP14324 419 aaKnown RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ACHEP22303 614 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CMA1P23946 247 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CRIP2P52943 208 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 PPP5CP53041 499 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 MAPK12P53778 367 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDR2Q01850 454 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 KLC1Q07866 573 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC39A6Q13433 755 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SNX1Q13596 522 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CUL3Q13618 768 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 COG2Q14746 738 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 P2RY6Q15077 328 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC40Q4G0X9 1142 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 FILIP1LQ4L180 1135 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CMPK2Q5EBM0 449 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 OTUD3Q5T2D3 398 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARHGAP17Q68EM7 881 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM53AQ6NSI3 398 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ADAM5Q6NVV9 412 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM173BQ6P4H8 233 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF449Q6P9G9 518 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 C15orf39Q6ZRI6 1047 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZBTB49Q6ZSB9 765 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 BZW1Q7L1Q6 419 aaKnown RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 NUP54Q7Z3B4 507 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPATA21Q7Z572 469 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 TTC5Q8N0Z6 440 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CEP112Q8N8E3 955 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR6J1Q8NGC5 347 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR52N5Q8NH56 324 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 OLIG1Q8TAK6 271 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 AFAP1L1Q8TED9 768 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 MUS81Q96NY9 551 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 TSPAN18Q96SJ8 248 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 EGFL8Q99944 293 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 URM1Q9BTM9 101 aaKnown RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 NUP58Q9BVL2 599 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 BARHL1Q9BZE3 327 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 MTMR12Q9C0I1 747 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CPVLQ9H3G5 476 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF696Q9H7X3 374 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDH20Q9HBT6 801 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC40A1Q9NP59 571 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANO10Q9NW15 660 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 CWC25Q9NXE8 425 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 DAPK2Q9UIK4 370 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 GRID1Q9ULK0 1009 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 RGPD8O14715 1765 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 PXDNQ92626 1479 aa2.96□□□□□ -1.94
HMGB1P41-201ENST00000520234 STK36Q9NRP7 1315 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF609O15014 1411 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SIPA1L3O60292 1781 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CASZ1Q86V15 1759 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A087WWV3 80 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A1B0GUA9 196 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 VPS37CA5D8V6 355 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 C2orf81A6NN90 581 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 E7EWF7 191 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZSCAN12O43309 604 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ERLIN1O75477 346 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 DFFBO76075 338 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 AP2A2O94973 939 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms