RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 NEUROG1Q92886 237 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 ST6GALNAC6Q969X2 333 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 DHX58Q96C10 678 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 RTP4Q96DX8 246 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 PLEKHF1Q96S99 279 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 HNRNPABQ99729 332 aaKnown RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 TXN2Q99757 166 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 CACNG6Q9BXT2 260 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 TM6SF1Q9BZW5 370 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 VN1R1Q9GZP7 353 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 DPH5Q9H2P9 285 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 RWDD1Q9H446 243 aaPredicted RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 FKRPQ9H9S5 495 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 GKN1Q9NS71 199 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 SLC35D1Q9NTN3 355 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 RABL2AQ9UBK7 228 aaPredicted RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 LRWD1Q9UFC0 647 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 FBXL5Q9UKA1 691 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 CCPG1Q9ULG6 757 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 EXOC7Q9UPT5 735 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 TDRKHQ9Y2W6 561 aaKnown RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 ZNF831Q5JPB2 1677 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 TNRC6CQ9HCJ0 1690 aaKnown RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 ADAMTS7Q9UKP4 1686 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 SBF1O95248 1867 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 BRCA1P38398 1863 aaKnown RBP3.77□□□□□ -1.81
GYPB-214ENST00000513557 ANKRD31Q8N7Z5 1873 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 PCNTO95613 3336 aa3.77□□□□□ -1.81
GYPB-214ENST00000513557 NPC1L1Q9UHC9 1359 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 UBR2Q8IWV8 1755 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 ABCC4O15439 1325 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SCN7AQ01118 1682 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 IGHV4OR15-8A0A075B7B6 117 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 A0A1W2PRB8 838 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 C5orf52A6NGY3 159 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 GAPDHSO14556 408 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 TSC22D2O75157 780 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 LUC7L3O95232 432 aaKnown RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 PGLSO95336 258 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 BMP15O95972 392 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 HAPLN1P10915 354 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 ITIH1P19827 911 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 PTGER4P35408 488 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 HSD17B3P37058 310 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 PDLIM4P50479 330 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 PDX1P52945 283 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 PTENP60484 403 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 KIF5AQ12840 1032 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 TNK1Q13470 666 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 CDO1Q16878 200 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 FAM174BQ3ZCQ3 159 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 CCDC40Q4G0X9 1142 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 MCMDC2Q4G0Z9 681 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 HSP90AB3PQ58FF7 597 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 STXBP5Q5T5C0 1151 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 NEK5Q6P3R8 708 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 MFSD7Q6UXD7 560 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 ZNF517Q6ZMY9 492 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 TMEM182Q6ZP80 229 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 RGS9BPQ6ZS82 235 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 RYBPQ8N488 228 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 THAP8Q8NA92 274 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 VANGL1Q8TAA9 524 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 LNX1Q8TBB1 728 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 ST7LQ8TDW4 575 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SHC3Q92529 594 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 THOC1Q96FV9 657 aaKnown RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 BSCL2Q96G97 398 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 C5orf30Q96GV9 206 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 CAPNS2Q96L46 248 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SGK494Q96LW2 274 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 TMEM204Q9BSN7 226 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 TCHPQ9BT92 498 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 POLR3CQ9BUI4 534 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 TRIM6Q9C030 488 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 AKIRIN1Q9H9L7 192 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 EBF2Q9HAK2 575 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 LRRC4Q9HBW1 653 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 APOBEC3GQ9HC16 384 aaKnown RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 PRMT8Q9NR22 394 aaPredicted RBP3.76□□□□□ -1.81
GYPB-214ENST00000513557 KLHL1Q9NR64 748 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 OLFML3Q9NRN5 406 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SLC38A7Q9NVC3 462 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.76□□□□□ -1.81
GYPB-214ENST00000513557 COX16Q9P0S2 106 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 TXNDC16Q9P2K2 825 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 CLCA3PQ9Y6N3 262 aa3.76□□□□□ -1.81
GYPB-214ENST00000513557 SAA2-SAA4A0A096LPE2 208 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 TRBV2A0A0J9YWF9 115 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 C13orf42A0A1B0GVH6 325 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 A0A1W2PPW3 197 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 CTAGE9A4FU28 777 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 YDJCA8MPS7 323 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 GPR89AB7ZAQ6 455 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 RIPK2O43353 540 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 RNASEH1O60930 286 aaKnown RBP3.75□□□□□ -1.81
GYPB-214ENST00000513557 CRCPO75575 148 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 BBOX1O75936 387 aa3.75□□□□□ -1.81
GYPB-214ENST00000513557 AKAP3O75969 853 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms