RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KCNN3Q9UGI6 736 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 ARMCX3Q9UH62 379 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PPIL1Q9Y3C6 166 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 PCDHGB6Q9Y5F9 930 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 VPS13CQ709C8 3753 aa3.52□□□□□ -1.85
PDLIM5-218ENST00000513341 TRAV17A0A0B4J275 112 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 A0A1W2PPL8 197 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 TCRBV7S2A1N4TA0A589 114 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 RGSL1A5PLK6 1076 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 C9J4A7 227 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 AGPSO00116 658 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SOCS5O75159 536 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SUN1O94901 812 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 UNC5CO95185 931 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PIGNO95427 931 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZBTB11O95625 1053 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SOD1P00441 154 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 HEXAP06865 529 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF30P17039 623 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 IGFBP2P18065 325 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SYT1P21579 422 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 AP1S1P61966 158 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ADORA2A-AS1P86434 159 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PIGFQ07326 219 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF844Q08AG5 666 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 Q0VFX4 171 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 RAPSNQ13702 412 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 NCF4Q15080 339 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 CNGA3Q16281 694 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 CD300EQ496F6 205 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 KRTCAP3Q53RY4 240 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 RESP18Q5W5W9 173 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ATL3Q6DD88 541 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PLEKHA7Q6IQ23 1121 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 RWDD4Q6NW29 188 aaKnown RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 IRGCQ6NXR0 463 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 DUS1LQ6P1R4 473 aaKnown RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM173BQ6P4H8 233 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 NPNTQ6UXI9 565 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ISLR2Q6UXK2 745 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM92BQ6ZTR7 304 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 RRAGAQ7L523 313 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF551Q7Z340 670 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 EID3Q8N140 333 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PAF1Q8N7H5 531 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 OR2Y1Q8NGV0 311 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 HAS2Q92819 552 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 NTAN1Q96AB6 310 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 COQ8BQ96D53 544 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 C18orf8Q96DM3 657 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 TBC1D31Q96DN5 1066 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 GBP5Q96PP8 586 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PSKH2Q96QS6 385 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 MCCC1Q96RQ3 725 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 TBCBQ99426 244 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 LHPPQ9H008 270 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ABCG8Q9H221 673 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 CARD9Q9H257 536 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 MRPL46Q9H2W6 279 aaKnown RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SYNCQ9H7C4 482 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SUDS3Q9H7L9 328 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 CATSPERBQ9H7T0 1116 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ACTR5Q9H9F9 607 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 FANCEQ9HB96 536 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PLCB1Q9NQ66 1216 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 P4HTMQ9NXG6 502 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 EHD3Q9NZN3 535 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 VSX1Q9NZR4 365 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ABI3Q9P2A4 366 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF624Q9P2J8 865 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 UBA2Q9UBT2 640 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SEC14L3Q9UDX4 400 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SERTAD3Q9UJW9 196 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 DNPEPQ9ULA0 475 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 BTRCQ9Y297 605 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF835Q9Y2P0 537 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM98Q9Y2Y6 226 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 SNX10Q9Y5X0 201 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 AP1M2Q9Y6Q5 423 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 FBN1P35555 2871 aaKnown RBP3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 PCM1Q15154 2024 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 CCDC88CQ9P219 2028 aa3.51□□□□□ -1.85
PDLIM5-218ENST00000513341 GTF3C1Q12789 2109 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 HCFC1P51610 2035 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TRIM49BA6NDI0 452 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TLCD2A6NGC4 264 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 LRRC14BA6NHZ5 514 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 A8MX80 341 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 ISM1B1AKI9 464 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 E9PLN8 166 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 FOXN3O00409 490 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 CHUKO15111 745 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 LDB2O43679 373 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 SNX2O60749 519 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC19A2O60779 497 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 PRAMEF11O60813 436 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 PALMO75781 387 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms