RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 THAP1Q9NVV9 213 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 GNAZP19086 355 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 CRHBPP24387 322 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 KLRK1P26718 216 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 PXNP49023 591 aaPredicted RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 AIF1P55008 147 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 FKBP1AP62942 108 aaKnown RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 SLC10A1Q14973 349 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 PRKD1Q15139 912 aaPredicted RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 ZCWPW2Q504Y3 356 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 TMEM31Q5JXX7 168 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 RBM48Q5RL73 367 aaKnown RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 ZNF773Q6PK81 442 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 IL20RBQ6UXL0 311 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 ADGRD2Q7Z7M1 963 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 MCOLN2Q8IZK6 566 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 OR2T12Q8NG77 320 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 OR52J3Q8NH60 311 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 CMTM7Q96FZ5 175 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 EPHX3Q9H6B9 360 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 TBC1D17Q9HA65 648 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 ZBTB20Q9HC78 741 aaPredicted RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 ANKMY1Q9P2S6 941 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 SNX12Q9UMY4 172 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 RPH3ALQ9UNE2 315 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 PIGBOS1A0A0B4J2F0 54 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 FABP3P05413 133 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 MDH1P40925 334 aaKnown RBP8.66□□□□□ -1.02
VCAN-208ENST00000512590 GRIA2P42262 883 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 NSG1P42857 185 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 RAB13P51153 203 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 TLE3Q04726 772 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 RHEBQ15382 184 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 OR6Y1Q8NGX8 325 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 TSPEARQ8WU66 669 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 STYXQ8WUJ0 223 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 SMPDL3AQ92484 453 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 NODALQ96S42 347 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 KCND3Q9UK17 655 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 MAP3K4Q9Y6R4 1608 aa8.66□□□□□ -1.02
VCAN-208ENST00000512590 C13orf42A0A1B0GVH6 325 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 WNT11O96014 354 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 NDUFV2P19404 249 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GSK3AP49840 483 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GJA9P57773 515 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ID2Q02363 134 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 RAB11BQ15907 218 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 SLC30A8Q8IWU4 369 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CEP76Q8TAP6 659 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 DDX1Q92499 740 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 ZNF578Q96N58 590 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 ACO2Q99798 780 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 SSX3Q99909 188 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 MRPL45Q9BRJ2 306 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 ENKD1Q9H0I2 346 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 THUMPD1Q9NXG2 353 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 PYCARDQ9ULZ3 195 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ALG5Q9Y673 324 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 MEIOCA2RUB1 952 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 DISC1C4P0D8 188 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 HAS3O00219 553 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PLSCR1O15162 318 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 IRAK2O43187 625 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ZMPSTE24O75844 475 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CNIH1O95406 144 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 IDO1P14902 403 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PGCP20142 388 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PBX3P40426 434 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 NOVA1P51513 510 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 E2F1Q01094 437 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 DEFB133Q30KQ1 61 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 BRAT1Q6PJG6 821 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 Q6ZSR6 202 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GPR155Q7Z3F1 870 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 OR7A2PQ8NGA2 310 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PGAP3Q96FM1 320 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 FBXL20Q96IG2 436 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CDRT15Q96T59 188 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PITX2Q99697 317 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 TREX2Q9BQ50 279 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 POLDIP3Q9BY77 421 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 GOLGA2P5Q9HBQ8 144 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 EURLQ9NYK6 297 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ATXN7L1Q9ULK2 861 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 CORO1CQ9ULV4 474 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 KANTRA0A1W2PQU2 76 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 TMEM150BA6NC51 233 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 SSX5O60225 188 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 SLC22A3O75751 556 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CBX7O95931 251 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 RHCEP18577 417 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms