RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 RSC1A1Q92681 617 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GAL3ST3Q96A11 431 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OTUB1Q96FW1 271 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CDKN2AIPNLQ96HQ2 116 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NAA11Q9BSU3 229 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 MED18Q9BUE0 208 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 KLHL25Q9H0H3 589 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 ELOVL6Q9H5J4 265 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NHEJ1Q9H9Q4 299 aaPredicted RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 PARVBQ9HBI1 364 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 SLC6A20Q9NP91 592 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 CD93Q9NPY3 652 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 KLRF1Q9NZS2 232 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 FOXJ2Q9P0K8 574 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 OPTCQ9UBM4 332 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 FKBPLQ9UIM3 349 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NOVA2Q9UNW9 492 aaKnown RBP2.71□□□□□ -1.98
CLOCK-209ENST00000511124 HYOU1Q9Y4L1 999 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 NFS1Q9Y697 457 aa2.71□□□□□ -1.98
CLOCK-209ENST00000511124 GMNCA6NCL1 334 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 LRRC10BA6NIK2 292 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GPR171O14626 319 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SLC19A2O60779 497 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SLC25A12O75746 678 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GUCA1CO95843 209 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 HLA-DQB2P05538 268 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 STSP08842 583 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ZGLP1P0C6A0 271 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 HIST1H1TP22492 207 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CNTFP26441 200 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ACVR2AP27037 513 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GDF1P27539 372 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 MSX1P28360 303 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PKLRP30613 574 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GKP32189 559 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 HOXD13P35453 343 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ARFIP1P53367 373 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 MLLT10P55197 1068 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CCZ1BP86790 482 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CCZ1P86791 482 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 POU4F1Q01851 419 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 DPYSL3Q14195 570 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CAPRIN1Q14444 709 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 POU6F1Q14863 301 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 BRD3Q15059 726 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 RPS6KA2Q15349 733 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SHBQ15464 509 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ELAVL1Q15717 326 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 DECR1Q16698 335 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 BEX5Q5H9J7 111 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF470Q6ECI4 717 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ALG1LQ6GMV1 187 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SULT1C3Q6IMI6 304 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF585AQ6P3V2 769 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 YTHDF3Q7Z739 585 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 B3GNT8Q7Z7M8 397 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 TRIM74Q86UV6 250 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF761Q86XN6 746 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FBXL14Q8N1E6 418 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FAM109AQ8N4B1 249 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 LMNTD1Q8N9Z9 388 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 STAG3L4Q8TBR4 150 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SNX33Q8WV41 574 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CAPSLQ8WWF8 208 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PMM1Q92871 262 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 RNASE6Q93091 150 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 EFHD2Q96C19 240 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SFXN2Q96NB2 322 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 INSM2Q96T92 566 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ACTRT3Q9BYD9 372 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 HOXD1Q9GZZ0 328 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 NSRP1Q9H0G5 558 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ATG10Q9H0Y0 220 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SLC26A1Q9H2B4 701 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ESRP2Q9H6T0 727 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 MMP25Q9NPA2 562 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 MIEF1Q9NQG6 463 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GPR27Q9NS67 375 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 ATAD3AQ9NVI7 634 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PARPBPQ9NWS1 579 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 STX18Q9P2W9 335 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FBXO5Q9UKT4 447 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 RNF112Q9ULX5 631 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FAF1Q9UNN5 650 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 CAMK2AQ9UQM7 478 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PLAAQ9Y263 795 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 NOP16Q9Y3C1 178 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FANCMQ8IYD8 2048 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 FAM90A27PA6NNH2 459 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 GTPBP1O00178 669 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 IL18BPO95998 194 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 TUBBP07437 444 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 TPBGLP0DKB5 382 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 COMTP21964 271 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PAICSP22234 425 aaKnown RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PTX3P26022 381 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-209ENST00000511124 LCN1P31025 176 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 PRIM2P49643 509 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SKOR1P84550 965 aa2.7□□□□□ -1.98
CLOCK-209ENST00000511124 SLC3A1Q07837 685 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms