RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 APOA4P06727 396 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GPIP06744 558 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 BPGMP07738 259 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KRT19P08727 400 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TRIM49P0CI25 452 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TRIM49CP0CI26 452 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 UMPSP11172 480 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CETPP11597 493 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 IL7P13232 177 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MYF5P13349 255 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF182P17025 639 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ITGA2P17301 1181 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CYP3A5P20815 502 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 EEF1B2P24534 225 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 FASP25445 335 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PSMA4P25789 261 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GCAP28676 217 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 UGT2B10P36537 528 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CAPGP40121 348 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 OPRL1P41146 370 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 BTDP43251 543 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GABRB2P47870 512 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SERPINH1P50454 418 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 NUDT2P50583 147 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CACNB3P54284 484 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RAD23AP54725 363 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MFAP3P55082 362 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TIMM10P62072 90 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 IGBP1P78318 339 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RAE1P78406 368 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PRKCDQ05655 676 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RALGDSQ12967 914 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 IL18R1Q13478 541 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DNASE1L3Q13609 305 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ALCAMQ13740 583 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MESDQ14696 234 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 STARD3Q14849 445 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DRAP1Q14919 205 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ACOX1Q15067 660 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CHI3L2Q15782 390 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 STK11Q15831 433 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CALCRLQ16602 461 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HIST2H2ACQ16777 129 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PRTGQ2VWP7 1150 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PLEKHG6Q3KR16 790 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC36A3Q495N2 470 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MINDY4Q4G0A6 757 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KLHL12Q53G59 568 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TEX44Q53QW1 395 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 YIF1BQ5BJH7 314 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ARMCX4Q5H9R4 360 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 NHSL2Q5HYW2 709 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GRTP1Q5TC63 336 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 LIN9Q5TKA1 542 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GARNL3Q5VVW2 1013 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TTC23Q5W5X9 447 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PNCKQ6P2M8 343 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MZT2AQ6P582 158 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DCUN1D2Q6PH85 259 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HACD2Q6Y1H2 254 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TIFABQ6ZNK6 161 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KRT77Q7Z794 578 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 C14orf80Q86SX3 495 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC22A16Q86VW1 577 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RALGPS2Q86X27 583 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CATSPER3Q86XQ3 398 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ERO1BQ86YB8 467 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RBFAQ8N0V3 343 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CLEC4FQ8N1N0 589 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 STX19Q8N4C7 294 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DHRSXQ8N5I4 330 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 OR6Q1Q8NGQ2 317 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 OR8K5Q8NH50 307 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RHOXF1Q8NHV9 184 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 LNX1Q8TBB1 728 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RAET1EQ8TD07 263 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DNAJA4Q8WW22 397 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ASB5Q8WWX0 329 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HDAC2Q92769 488 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MYDGFQ969H8 173 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 FBXL8Q96CD0 374 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HDAC11Q96DB2 347 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ARL5BQ96KC2 179 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GLT1D1Q96MS3 346 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TSNARE1Q96NA8 513 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 QKIQ96PU8 341 aaKnown RBP eCLIP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 NOTCH4Q99466 2003 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SORT1Q99523 831 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GAL3ST1Q99999 423 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MTG1Q9BT17 334 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CENPOQ9BU64 300 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TEKT3Q9BXF9 490 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MTMR12Q9C0I1 747 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 INTS2Q9H0H0 1204 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 THAP2Q9H0W7 228 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ING2Q9H160 280 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ATP13A3Q9H7F0 1226 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms