RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PTGER3P43115 390 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 DNA2P51530 1060 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 IRX4P78413 519 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 MYL7Q01449 175 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 MAPRE1Q15691 268 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 TAB1Q15750 504 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 VWC2Q2TAL6 325 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 OR7A2PQ8NGA2 310 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 LRRC15Q8TF66 581 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 PRAM1Q96QH2 718 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 GAL3ST4Q96RP7 486 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 NYXQ9GZU5 481 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 CNOT10Q9H9A5 744 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 FAM120CQ9NX05 1096 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 WIPI2Q9Y4P8 454 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 MAGED1Q9Y5V3 778 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 PIK3C2GO75747 1445 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 USP6P35125 1406 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 KIAA1551Q9HCM1 1747 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 GPRASP1Q5JY77 1395 aa4.26□□□□□ -1.73
TOPBP1-206ENST00000508524 KIF1BO60333 1816 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 ABCA7Q8IZY2 2146 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 COL18A1P39060 1754 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 A0A1W2PR64 198 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CASTOR2A6NHX0 329 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 C2CD4DB7Z1M9 353 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 ATP1B1P05026 303 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CYP11B2P19099 503 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CD22P20273 847 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 NNMTP40261 264 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 RANBP2P49792 3224 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CLDN15P56746 228 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 TMEM132DQ14C87 1099 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 NPTX1Q15818 432 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 OR4A47Q6IF82 309 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 NOTUMQ6P988 496 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 GDPGP1Q6ZNW5 385 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 TC2NQ8N9U0 490 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CNRIP1Q96F85 164 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 SLC45A3Q96JT2 553 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 MAP3K3Q99759 626 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 POLR3GLQ9BT43 218 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 HOXD1Q9GZZ0 328 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CPSF3Q9UKF6 684 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 CHKBQ9Y259 395 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 BRD4O60885 1362 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 ADAMTS9Q9P2N4 1935 aa4.25□□□□□ -1.73
TOPBP1-206ENST00000508524 ASB14A6NK59 587 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 SHISA7A6NL88 538 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 SRRM5B3KS81 715 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 ACSL3O95573 720 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 CSN3P07498 182 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 OR3A2P47893 321 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 LMAN1P49257 510 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 CCR3P51677 355 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 POLR2LP62875 67 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TRAP1Q12931 704 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 PRKG2Q13237 762 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TRIM29Q14134 588 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 PTPN14Q15678 1187 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 BMP2KLQ5H9B9 411 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 METTL4Q8N3J2 472 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 POM121L12Q8N7R1 296 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 ATP8B4Q8TF62 1192 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 ATXN7L3BQ96GX2 97 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 MUS81Q96NY9 551 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 FEVQ99581 238 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 CPNE1Q99829 537 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 APOL6Q9BWW8 343 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TDRD1Q9BXT4 1180 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 SLC2A11Q9BYW1 496 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 MAF1Q9H063 256 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 GNB4Q9HAV0 340 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 CDH20Q9HBT6 801 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TP53TG3Q9ULZ0 132 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 NSD2O96028 1365 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TRPM1Q7Z4N2 1603 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 TOGARAM1Q9Y4F4 1720 aa4.24□□□□□ -1.73
TOPBP1-206ENST00000508524 SPATA31E1Q6ZUB1 1445 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 C10orf71Q711Q0 1435 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 ABCC6O95255 1503 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 TCRBV21S2A2A0A5A6 115 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 SERINC4A6NH21 518 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 THEGLP0DJG4 465 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 PRKAR1AP10644 381 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 EPCAMP16422 314 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 AZU1P20160 251 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 ASCL1P50553 236 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 LIMK2P53671 638 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms