RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FAM45BPQ6NSW5 357 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 H3F3CQ6NXT2 135 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 TMEM207Q6UWW9 146 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 STRA8Q7Z7C7 330 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 LURAP1LQ8IV03 231 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 FAM45AQ8TCE6 357 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 TSLPQ969D9 159 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 FBXL8Q96CD0 374 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 LRRC39Q96DD0 335 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 PEX11GQ96HA9 241 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 CAPZA3Q96KX2 299 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 TRIM51Q9BSJ1 452 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 SPNS1Q9H2V7 528 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 LANCL2Q9NS86 450 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 VWA7Q9Y334 891 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 PSAT1Q9Y617 370 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 TRBC2A0A5B9 178 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 CTAGE15A4D2H0 777 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 OR1F1O43749 312 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 GALR3O60755 368 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 PRAMEF2O60811 474 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 ZG16O60844 167 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 SEC31AO94979 1220 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 GUCA1CO95843 209 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 MST1P26927 711 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 ITGA8P53708 1063 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 PER3P56645 1201 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 DR1Q01658 176 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 PWP1Q13610 501 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 ABRAXAS2Q15018 415 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 HERC3Q15034 1050 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 CTAGE6Q86UF2 777 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 KLHL7Q8IXQ5 586 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 BEST3Q8N1M1 668 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC5A11Q8WWX8 675 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 ATL1Q8WXF7 558 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 NEIL2Q969S2 332 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 PDLIM5Q96HC4 596 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 NPAS2Q99743 824 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 GRPEL1Q9HAV7 217 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 MMP25Q9NPA2 562 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 STMN3Q9NZ72 180 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 ABI3Q9P2A4 366 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 TEKT2Q9UIF3 430 aa12.25□□□□□ -0.45
HMGCS1-205ENST00000508319 A8MUI8 341 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 MAGEB17A8MXT2 336 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 TTI1O43156 1089 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 DNAJB6O75190 326 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 RASAL1O95294 804 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 B3GALT4O96024 378 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ALOX12P18054 663 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 IL10P22301 178 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 APCP25054 2843 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 SCTRP47872 440 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 REEP5Q00765 189 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 PMP22Q01453 160 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 SRSF11Q05519 484 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 FASTKD3Q14CZ7 662 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 NSDHLQ15738 373 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 DEFB134Q4QY38 66 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 SFT2D3Q587I9 215 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 C1QL3Q5VWW1 255 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 FCRLBQ6BAA4 426 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 PAPD4Q6PIY7 484 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ZC3HC1Q86WB0 502 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKMY2Q8IV38 441 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKRD53Q8N9V6 530 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 PLPP5Q8NEB5 264 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 NT5CQ8TCD5 201 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 PCNX1Q96RV3 2341 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ZFATQ9P243 1243 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 ZFP69BQ9UJL9 534 aa12.24□□□□□ -0.45
HMGCS1-205ENST00000508319 NPEPPSL1A6NEC2 478 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 C4orf51C9J302 202 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 CDC7O00311 574 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 FANCGO15287 622 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 MAN1A2O60476 641 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 FHP07954 510 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 AHRP35869 848 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ARL4CP56559 192 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 OLR1P78380 273 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 RGS1Q08116 209 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 MGAT5Q09328 741 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 HYAL2Q12891 473 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 TUBA3CQ13748 450 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 CSHL1Q14406 222 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF460Q14592 562 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 USP10Q14694 798 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 EXT1Q16394 746 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ACER2Q5QJU3 275 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms