RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 VN1R4Q7Z5H5 301 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 RPS19BP1Q86WX3 136 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 CD200R1Q8TD46 325 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 PEX11GQ96HA9 241 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 OLFM1Q99784 485 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 FBXO5Q9UKT4 447 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 KLF13Q9Y2Y9 288 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 SYNDIG1LA6NDD5 238 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 E9PLN8 166 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 KLRC4-KLRK1H3BQV0 150 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 NDUFS4O43181 175 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC25A12O75746 678 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 FHP07954 510 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC1A2P43004 574 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 AP1S2P56377 157 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC26A5P58743 744 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 USP10Q14694 798 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 TRIP13Q15645 432 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 PIWIL4Q7Z3Z4 852 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC26A11Q86WA9 606 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 DENND6AQ8IWF6 608 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 LRRC56Q8IYG6 542 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 MFSD9Q8NBP5 474 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 GRK7Q8WTQ7 553 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 TM4SF19Q96DZ7 209 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 C14orf79Q96F83 325 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 FRMD6Q96NE9 622 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SIGLEC12Q96PQ1 595 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 VKORC1Q9BQB6 163 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 RBSNQ9H1K0 784 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC24A3Q9HC58 644 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 ANKRD10Q9NXR5 420 aa19.79■□□□□ 0.76
SQSTM1-210ENST00000506042 FOXO6A8MYZ6 492 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 AVILO75366 819 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 SERPIND1P05546 499 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 NAE1Q13564 534 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 TMEM211Q6ICI0 200 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 SPINK14Q6IE38 97 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 CYP4X1Q8N118 509 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 SPOCK3Q9BQ16 436 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 NAT9Q9BTE0 207 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 AARSD1Q9BTE6 412 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 CDCP1Q9H5V8 836 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 LZTFL1Q9NQ48 299 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 ITGB1BP2Q9UKP3 347 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 LRBAP50851 2863 aa19.78■□□□□ 0.76
SQSTM1-210ENST00000506042 TFECO14948 347 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 OR1F1O43749 312 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 PRMT3O60678 531 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 CDC123O75794 336 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 TTC4O95801 387 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 STATHP02808 62 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 CDH1P12830 882 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 ALOX12P18054 663 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 HPDP32754 393 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 RHAGQ02094 409 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 CSHL1Q14406 222 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 DUPD1Q68J44 220 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 PAOXQ6QHF9 649 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 KCT2Q8NC54 265 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 GIMAP7Q8NHV1 300 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 MAGOHBQ96A72 148 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC30A3Q99726 388 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 ARL15Q9NXU5 204 aa19.77■□□□□ 0.76
SQSTM1-210ENST00000506042 GOLGA6L10A0A0M3HER8 536 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 TCRBV7S3A2A0A539 114 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 TRBC2A0A5B9 178 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 FEZF1A0PJY2 475 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 USP27XA6NNY8 438 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 NME2P1O60361 137 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 NME2P22392 152 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 IL2P60568 153 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 ADORA2A-AS1P86434 159 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 PDAP1Q13442 181 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 CYHR1Q6ZMK1 362 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 ZNF662Q6ZS27 426 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 PRSS41Q7RTY9 318 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 STRA8Q7Z7C7 330 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 CAND1Q86VP6 1230 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 TRPV3Q8NET8 790 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 AGAP11Q8TF27 550 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 ASB5Q8WWX0 329 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 PTCHD1Q96NR3 888 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 SERPINB12Q96P63 405 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 SGPP1Q9BX95 441 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 DEFB126Q9BYW3 111 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 TRIM8Q9BZR9 551 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 ATG10Q9H0Y0 220 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 TSPAN10Q9H1Z9 355 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 CORO1CQ9ULV4 474 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 PPT2Q9UMR5 302 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 PDE10AQ9Y233 779 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 DYRK1BQ9Y463 629 aa19.76■□□□□ 0.75
SQSTM1-210ENST00000506042 A0A088AWK7 358 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 GALR3O60755 368 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 ENO2P09104 434 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 RNH1P13489 461 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 PGAM1P18669 254 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms