RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SNX7Q9UNH6 387 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 SLC9A8Q9Y2E8 581 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 BRCA1P38398 1863 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 HMX3A6NHT5 357 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ADAMDEC1O15204 470 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TAPBPO15533 448 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SUV39H1O43463 412 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJB5O75953 348 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 IL6P05231 212 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SRCP12931 536 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PEPDP12955 493 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 EVI2BP34910 448 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CCT3P49368 545 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MRPS6P82932 125 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SCN1BQ07699 218 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FADDQ13158 208 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 P2RY14Q15391 338 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SSX1Q16384 188 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CTXN3Q4LDR2 81 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TOR2AQ5JU69 321 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MTFR2Q6P444 385 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 C16orf62Q7Z3J2 963 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 GLRX5Q86SX6 157 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CCDC190Q86UF4 302 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF280BQ86YH2 543 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SYT12Q8IV01 421 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 BBS7Q8IWZ6 715 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ADGRG2Q8IZP9 1017 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 IQCF1Q8N6M8 205 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 OTULINQ96BN8 352 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TM9SF2Q99805 663 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RTP3Q9BQQ7 232 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CINPQ9BW66 212 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ARNT2Q9HBZ2 717 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 NMRK2Q9NPI5 230 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ARL15Q9NXU5 204 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF226Q9NYT6 803 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ALG5Q9Y673 324 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PRSS21Q9Y6M0 314 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ARID1BQ8NFD5 2236 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 YY2O15391 372 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PCDH7O60245 1069 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MTX2O75431 263 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 EPN2O95208 641 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CCNDBP1O95273 360 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 F2P00734 622 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RETP07949 1114 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CNR2P34972 360 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 DDOSTP39656 456 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 KIR3DL1P43629 444 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CDC42EP1Q00587 391 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FCHO2Q0JRZ9 810 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TAF10Q12962 218 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CSTF3Q12996 717 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MRPL28Q13084 256 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PPIGQ13427 754 aaKnown RBP eCLIP7.35□□□□□ -1.232e-8■■□□□ 11.7
NEDD9-208ENST00000504387 KEAP1Q14145 624 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 NFE2Q16621 373 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 VMACQ2NL98 169 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 C5orf22Q49AR2 442 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MPPE1Q53F39 396 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ATXN7L2Q5T6C5 722 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SLX4IPQ5VYV7 408 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 GDF6Q6KF10 455 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TMC8Q8IU68 726 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TAGAPQ8N103 731 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 NAGSQ8N159 534 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 AADATQ8N5Z0 425 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 C19orf18Q8NEA5 215 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PIH1D2Q8WWB5 315 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 IPCEF1Q8WWN9 437 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FOXJ1Q92949 421 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RIT1Q92963 219 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF566Q969W8 418 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SIPA1Q96FS4 1042 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ART5Q96L15 291 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 COL21A1Q96P44 957 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RNF121Q9H920 327 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SERHLQ9NQF3 203 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FZD4Q9ULV1 537 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TRIP12Q14669 1992 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SBF1O95248 1867 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MANBAO00462 879 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 KCNK5O95279 499 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CSF3P09919 207 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 LAMP1P11279 417 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ETFAP13804 333 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 EPB42P16452 691 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RPL17P18621 184 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TNNI3P19429 210 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 HLA-DPA1P20036 260 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SDC2P34741 201 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 BCL2L1Q07817 233 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 IL18Q14116 193 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FGFBP1Q14512 234 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SNAPC1Q16533 368 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms