RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 EIF2B3Q9NR50 452 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 UXTQ9UBK9 157 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 GTF2IRD1Q9UHL9 959 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 EIPR1Q53HC9 387 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 COQ5Q5HYK3 327 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TOR2AQ5JU69 321 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 LEMD1Q68G75 181 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CAMKVQ8NCB2 501 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SMARCD2Q92925 531 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 OR52E6Q96RD3 313 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TLE6Q9H808 572 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 A0A087X1B8 175 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 LYRM1O43325 122 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 URODP06132 367 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 GKN3PP0CG01 181 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RPS27AP62979 156 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 UBA52P62987 128 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CLINT1Q14677 625 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 BANPQ8N9N5 519 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SLC28A3Q9HAS3 691 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SRPRAP08240 638 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 HNRNPH3P31942 346 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TXNL4AP83876 142 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PPIGQ13427 754 aaKnown RBP eCLIP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SNTB1Q13884 538 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TEX30Q5JUR7 227 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SLC35F1Q5T1Q4 408 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 H3F3CQ6NXT2 135 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SPATA19Q7Z5L4 167 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 NTAN1Q96AB6 310 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ACDQ96AP0 544 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 FCRL4Q96PJ5 515 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 GHITMQ9H3K2 345 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 FAM230AA0A1W2PPH8 454 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CLIC3O95833 236 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PRKCDQ05655 676 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TAF1AQ15573 450 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ANGEL2Q5VTE6 544 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 GPR153Q6NV75 609 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PNLDC1Q8NA58 520 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 NUDT11Q96G61 164 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TRAF4Q9BUZ4 470 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TAS2R16Q9NYV7 291 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 DENND4BO75064 1496 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 STSP08842 583 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CYP2A6P11509 494 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ACO1P21399 889 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CPT2P23786 658 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 GABRA2P47869 451 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 FXR2P51116 673 aaKnown RBP eCLIP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RAP1AP62834 184 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 LIPMQ5VYY2 423 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PLPP5Q8NEB5 264 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 MITD1Q8WV92 249 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 OPALINQ96PE5 141 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ENPP5Q9UJA9 477 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PUS1Q9Y606 427 aaKnown RBP eCLIP4.64□□□□□ -1.671e-9■□□□□ 10.7
NEAT1-202ENST00000501122 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L21D6R901 530 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 LYPLA1O75608 230 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 HLA-DPB1P04440 258 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CCR7P32248 378 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ETV6P41212 452 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 KCNAB2Q13303 367 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ACTL9Q8TC94 416 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 THAP3Q8WTV1 239 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RAB39BQ96DA2 213 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 OR7D2Q96RA2 312 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TEX10Q9NXF1 929 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ANGPT4Q9Y264 503 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 BAZ1AQ9NRL2 1556 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 HLA-DMAP28067 261 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF468Q5VIY5 522 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 MRNIPQ6NTE8 343 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SLC24A4Q8NFF2 622 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF512Q96ME7 567 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ADAM19Q9H013 955 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SH2B3Q9UQQ2 575 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 MFHAS1Q9Y4C4 1052 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CEBPBP17676 345 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CCR1P32246 355 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 MTHFSDQ2M296 383 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 DMRTA1Q5VZB9 504 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 OR2T2Q6IF00 324 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ADGRD1Q6QNK2 874 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 BAIAP2L2Q6UXY1 529 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RIOX1Q9H6W3 641 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 IPPKQ9H8X2 491 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 TFCP2L1Q9NZI6 479 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PRSS47A8MTI9 375 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 JAGN1Q8N5M9 183 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 C22orf15Q8WYQ4 148 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 FEM1CQ96JP0 617 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 ERVV-2B6SEH9 535 aa4.64□□□□□ -1.67
NEAT1-202ENST00000501122 SLC33A1O00400 549 aaPredicted RBP4.64□□□□□ -1.67
NEAT1-202ENST00000501122 CYB5R3P00387 301 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms