RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CRELD1Q96HD1 420 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 PITX2Q99697 317 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TMCC3Q9ULS5 477 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 MAPRE3Q9UPY8 281 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CFAP20Q9Y6A4 193 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 A0A1W2PRG6 482 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CLIC1O00299 241 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 ORC5O43913 435 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF30P17039 623 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TACR1P25103 407 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 GANABQ14697 944 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TMIGD1Q6UXZ0 262 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 ATCAYQ86WG3 371 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CPA6Q8N4T0 437 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 HYLS1Q96M11 299 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CLEC4MQ9H2X3 399 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 ING4Q9UNL4 249 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 YARS2Q9Y2Z4 477 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 MROH6A6NGR9 719 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 OR7A17O14581 309 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 RFPL3O75679 317 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 CCNB2O95067 398 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 OTCP00480 354 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MAGEA2P43356 314 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PER3P56645 1201 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PTPRRQ15256 657 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 C9orf62Q8N4C0 152 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PIH1D2Q8WWB5 315 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 C1GALT1C1Q96EU7 318 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 GTPBP2Q9BX10 602 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 SLAMF7Q9NQ25 335 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PAK6Q9NQU5 681 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 RHCGQ9UBD6 479 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MED16Q9Y2X0 877 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 LYRM1O43325 122 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 HRGP04196 525 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 HMBSP08397 361 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 HLA-DMAP28067 261 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 OAZ1P54368 228 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■□□□□ 10.8
GAPVD1-220ENST00000497580 ZNF235Q14590 738 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 P2RY14Q15391 338 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 AANATQ16613 207 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 VMACQ2NL98 169 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PUS10Q3MIT2 529 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 BHLHB9Q6PI77 547 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 LIPIQ6XZB0 460 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 TOE1Q96GM8 510 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MS4A7Q9GZW8 240 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MED28Q9H204 178 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 SLC9A8Q9Y2E8 581 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 SLC9A3R1O14745 358 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 SOX14O95416 240 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 CTSHP09668 335 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PKMP14618 531 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 TALDO1P37837 337 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MFSD13AQ14CX5 517 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 LRRC17Q8N6Y2 441 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 LHFPL5Q8TAF8 219 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 KCNN2Q9H2S1 579 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 U3KQ87 197 aa12.61□□□□□ -0.39
GAPVD1-220ENST00000497580 PCDH17O14917 1159 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SUV39H1O43463 412 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 PRAMEF1O95521 474 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SYPP08247 313 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 TGFB3P10600 412 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SDC2P34741 201 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 CDC42P60953 191 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 GRM7Q14831 915 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SLC27A1Q6PCB7 646 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 PPP1R2P1Q96PQ5 205 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 CLN6Q9NWW5 311 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 SPATA2Q9UM82 520 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 VPS9D1Q9Y2B5 631 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 CASTOR2A6NHX0 329 aa12.6□□□□□ -0.39
GAPVD1-220ENST00000497580 FPGTO14772 594 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms