RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	MIEF2	Q96C03	454 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	MTBP	Q96DY7	904 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	WDR34	Q96EX3	536 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ABHD17A	Q96GS6	310 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	GPR78	Q96P69	363 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	CCDC77	Q9BR77	488 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	VPS11	Q9H270	941 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	NT5DC2	Q9H857	520 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ANKH	Q9HCJ1	492 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ACSS2	Q9NR19	701 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	C14orf105	Q9NVL8	296 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	COPG2	Q9UBF2	871 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TRPC4	Q9UBN4	977 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	CTSF	Q9UBX1	484 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	CACNA1G	O43497	2377 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	URAD	A6NGE7	173 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899		B8ZZF3	427 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	AGPS	O00116	658 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	MAP2K7	O14733	419 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	NDUFS4	O43181	175 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	KLK8	O60259	260 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	KLHL41	O60662	606 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	CEACAM4	O75871	244 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	CYC1	P08574	325 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	RBP1	P09455	135 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	MTHFD2	P13995	350 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	IL10	P22301	178 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	GMPR	P36959	345 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	CASP2	P42575	452 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	HSPA7	P48741	367 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	SOX8	P57073	446 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	SKP1	P63208	163 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	IRF9	Q00978	393 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	KLC1	Q07866	573 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	RGS1	Q08116	209 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	LAPTM5	Q13571	262 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	ATP1A4	Q13733	1029 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	COL9A2	Q14055	689 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC29A2	Q14542	456 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	RBBP5	Q15291	538 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	TBCC	Q15814	346 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	TSNAXIP1	Q2TAA8	658 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMIGD1	Q6UXZ0	262 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	TIFAB	Q6ZNK6	161 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	LIAT1	Q6ZQX7	453 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	PPP1R32	Q7Z5V6	425 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	CFAP46	Q8IYW2	2715 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	KRT78	Q8N1N4	520 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	AFAP1L2	Q8N4X5	818 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	ANKRD53	Q8N9V6	530 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	KCT2	Q8NC54	265 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	OR9A4	Q8NGU2	314 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	UHMK1	Q8TAS1	419 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	UBTD2	Q8WUN7	234 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	MACROD1	Q9BQ69	325 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	OCSTAMP	Q9BR26	566 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	EFCAB11	Q9BUY7	163 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	SOX17	Q9H6I2	414 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	CLK4	Q9HAZ1	481 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	MLXIPL	Q9NP71	852 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	P4HTM	Q9NXG6	502 aa		11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	G3BP2	Q9UN86	482 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	MRPS2	Q9Y399	296 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-233	ENST00000495899	SNRNP200	O75643	2136 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SPTB	P11277	2137 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SUPT3H	B4E1H0	165 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	TRIM49D1	C9J1S8	452 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	UBXN8	O00124	270 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	CCNT2	O60583	730 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SUPT3H	O75486	399 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SERPINA6	P08185	405 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	ALOX12	P18054	663 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	VARS	P26640	1264 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	HPD	P32754	393 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	CCL11	P51671	97 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	ALDH18A1	P54886	795 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	E2F2	Q14209	437 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	VWA2	Q5GFL6	755 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	PAGE2B	Q5JRK9	111 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	DCAF10	Q5QP82	559 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	ABHD13	Q7L211	337 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	LCA5	Q86VQ0	697 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SNX31	Q8N9S9	440 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	CLEC1A	Q8NC01	280 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	EXT2	Q93063	718 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	ESAM	Q96AP7	390 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	MOCOS	Q96EN8	888 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	PTCD3	Q96EY7	689 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	CRB3	Q9BUF7	120 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	YIPF2	Q9BWQ6	316 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	TRIM55	Q9BYV6	548 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	SPNS1	Q9H2V7	528 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	PPCS	Q9HAB8	311 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	OPTC	Q9UBM4	332 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	C3orf18	Q9UK00	162 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMCO1	Q9UM00	188 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	PCDHGB7	Q9Y5F8	929 aa		11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	TNPO3	Q9Y5L0	923 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-233	ENST00000495899	HS3ST3B1	Q9Y662	390 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms