RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF781Q8N8C0 355 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 WDR20Q8TBZ3 569 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 PROKR1Q8TCW9 393 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 AGR3Q8TD06 166 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 TWIST2Q8WVJ9 160 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 USP7Q93009 1102 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 ZNF501Q96CX3 271 aaPredicted RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 METTL2AQ96IZ6 378 aaKnown RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 KCNC2Q96PR1 638 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 MTERF1Q99551 399 aaKnown RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 SHCBP1LQ9BZQ2 653 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 REXO4Q9GZR2 422 aaKnown RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 POLR1BQ9H9Y6 1135 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 ANKHQ9HCJ1 492 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 FAM60AQ9NP50 221 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 DMRT3Q9NQL9 472 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 ACSS2Q9NR19 701 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 ENAMQ9NRM1 1142 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 PCDHB3Q9Y5E6 796 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 SPACA6W5XKT8 324 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 PTPRBP23467 1997 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ARHGAP10A1A4S6 786 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SERTM1A2A2V5 107 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 TCP11X1B4DZS4 312 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 UBFD1O14562 309 aaKnown RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 POLR3GO15318 223 aaPredicted RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 HDAC3O15379 428 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 SCRG1O75711 98 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 RSL1D1O76021 490 aaKnown RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 MAPK1P28482 360 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 YBX1P67809 324 aaKnown RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 MAD2L1Q13257 205 aaPredicted RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 FAM53BQ14153 422 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SPIN4Q56A73 249 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SGO1Q5FBB7 561 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 FRMPD2BQ6IN97 320 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 PRMT9Q6P2P2 845 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 PARP9Q8IXQ6 854 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ANKRD53Q8N9V6 530 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ZNF740Q8NDX6 193 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ZNF473Q8WTR7 871 aaKnown RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 RGMAQ96B86 450 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 PPP3R2Q96LZ3 170 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ZNF285Q96NJ3 590 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 DPH2Q9BQC3 489 aaPredicted RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 MS4A8Q9BY19 250 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 TRIM55Q9BYV6 548 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 NRSN2Q9GZP1 204 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 ACTR5Q9H9F9 607 aaPredicted RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 CLK4Q9HAZ1 481 aaKnown RBP14.23□□□□□ -0.13
ACTB-213ENST00000493945 SLC12A4Q9UP95 1085 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SATB2Q9UPW6 733 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 SLC22A7Q9Y694 548 aa14.23□□□□□ -0.13
ACTB-213ENST00000493945 HYKKA2RU49 373 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 FITM1A5D6W6 292 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 PPP6CO00743 305 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ITM2AO43736 263 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 SKAP2O75563 359 aaPredicted RBP14.22□□□□□ -0.13
ACTB-213ENST00000493945 TGDSO95455 350 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 PDYNP01213 254 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 KLK3P07288 261 aaPredicted RBP14.22□□□□□ -0.13
ACTB-213ENST00000493945 CD63P08962 238 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 AGXTP21549 392 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 CCR10P46092 362 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 GABRA4P48169 554 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 GABREP78334 506 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ACSM2AQ08AH3 577 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 FOXC1Q12948 553 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 NR6A1Q15406 480 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 AP5B1Q2VPB7 878 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ATP6AP1LQ52LC2 224 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 TOR1AIP1Q5JTV8 583 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 KHDRBS2Q5VWX1 349 aaKnown RBP14.22□□□□□ -0.13
ACTB-213ENST00000493945 ACSM2BQ68CK6 577 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 FAM47EQ6ZV65 393 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ACAD11Q709F0 780 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 VN1R4Q7Z5H5 301 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 NUDT13Q86X67 352 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 LRRC34Q8IZ02 419 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 FAM9CQ8IZT9 166 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 OR2L5Q8NG80 312 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ADAMTS18Q8TE60 1221 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 CLIP3Q96DZ5 547 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 TM4SF19Q96DZ7 209 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 C19orf60Q96EN9 201 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 CHMP6Q96FZ7 201 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 KCNA7Q96RP8 456 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 SORT1Q99523 831 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 TBCDQ9BTW9 1192 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 SLC6A16Q9GZN6 736 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 THSD1Q9NS62 852 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 CUTCQ9NTM9 273 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 MRGBPQ9NV56 204 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 OCIAD1Q9NX40 245 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 VPS29Q9UBQ0 182 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
ACTB-213ENST00000493945 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms