RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CD109Q6YHK3 1445 aa4.11□□□□□ -1.75
GTF3A-208ENST00000493903 MADDQ8WXG6 1647 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 A0A1B0GVT2 93 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 A0A1W2PN81 502 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 DENND3A2RUS2 1198 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 C2orf81A6NN90 581 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CCDC169A6NNP5 214 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 C2CD4DB7Z1M9 353 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 INAFM1C9JVW0 142 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 GMFGO60234 142 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ACSL4O60488 711 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 KCNJ13O60928 360 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CLN5O75503 358 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 LINC00271P0C7V0 271 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 PDHBP11177 359 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 RALAP11233 206 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CD59P13987 128 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 HOXB2P14652 356 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 STIP1P31948 543 aaKnown RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CHRNA7P36544 502 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 MAGEA11P43364 429 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 NKX2-1P43699 371 aaPredicted RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TRPC1P48995 793 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CLCN4P51793 760 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 THOP1P52888 689 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ISL1P61371 349 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 GABPB1Q06547 395 aaPredicted RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 DMPKQ09013 629 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 Q0VFX4 171 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TRAP1Q12931 704 aaKnown RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 DMP1Q13316 513 aaPredicted RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 RBMS2Q15434 407 aaKnown RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CARTPTQ16568 116 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 STX1AQ16623 288 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ITPRIPL2Q3MIP1 535 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ODF3L2Q3SX64 289 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ATAD3BQ5T9A4 648 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 C20orf194Q5TEA3 1177 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CTR9Q6PD62 1173 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 SHC4Q6S5L8 630 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 GFRALQ6UXV0 394 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 KMT5CQ86Y97 462 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CCDC60Q8IWA6 550 aaPredicted RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 PGBD5Q8N414 524 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 MINDY2Q8NBR6 621 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF548Q8NEK5 533 aaPredicted RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 OR52B4Q8NGK2 314 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TAAR6Q96RI8 345 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TCHPQ9BT92 498 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 POLR1EQ9GZS1 481 aaKnown RBP4.1□□□□□ -1.75
GTF3A-208ENST00000493903 SIRPDQ9H106 197 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 SLITRK6Q9H5Y7 841 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TMEM231Q9H6L2 316 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TRPC7Q9HCX4 862 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TCF7L2Q9NQB0 619 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 HIF1ANQ9NWT6 349 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 C11orf21Q9P2W6 132 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CLIP2Q9UDT6 1046 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 SLC12A6Q9UHW9 1150 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 CTNNA3Q9UI47 895 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 TEKT2Q9UIF3 430 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 MGAT4BQ9UQ53 548 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 PTGDR2Q9Y5Y4 395 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 DISP3Q9P2K9 1392 aa4.1□□□□□ -1.75
GTF3A-208ENST00000493903 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 TRIM49BA6NDI0 452 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ANTXRLA6NF34 631 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 UBXN8O00124 270 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CHEK1O14757 476 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 IKBKBO14920 756 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 KDM4BO94953 1096 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 STBD1O95210 358 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 PCCBP05166 539 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 FCARP24071 287 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 OTX2P32243 289 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 TNFSF10P50591 281 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 NR0B1P51843 470 aaKnown RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 BRWD1-AS2P59051 145 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CHIT1Q13231 466 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 GPM6BQ13491 265 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 RIPK1Q13546 671 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 SNX1Q13596 522 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CCDC142Q17RM4 750 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 PHLDA2Q53GA4 152 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CENPPQ6IPU0 288 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 UGT3A1Q6NUS8 523 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 FAM159AQ6UWV7 190 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 RAD9BQ6WBX8 426 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CDHR3Q6ZTQ4 885 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 MRPL10Q7Z7H8 261 aaKnown RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF554Q86TJ5 538 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 TMEM219Q86XT9 240 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 UNC5CLQ8IV45 518 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 TDHQ8IZJ6 230 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 BCORP1Q8N888 145 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 OR52M1Q8NGK5 317 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 SELENOMQ8WWX9 145 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms