RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TARM1	B6A8C7	271 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	SNPH	O15079	494 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	MATN3	O15232	486 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	FOXS1	O43638	330 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	BUD23	O43709	281 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	MFSD11	O43934	449 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	KDM1A	O60341	852 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	NRP2	O60462	931 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	HCN1	O60741	890 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	GLS	O94925	669 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	VENTX	O95231	258 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	IPO7	O95373	1038 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	PTMA	P06454	111 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CD48	P09326	243 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	H2AFZ	P0C0S5	128 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	RALB	P11234	206 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	SKIL	P12757	684 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CCNC	P24863	283 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	HMGCL	P35914	325 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CPOX	P36551	454 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CDKN1A	P38936	164 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CCNF	P41002	786 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	PRLHR	P49683	370 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	MTTP	P55157	894 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZBED6	P86452	979 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	NSDHL	Q15738	373 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	IFI16	Q16666	785 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	TYSND1	Q2T9J0	566 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	PRTG	Q2VWP7	1150 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	GARNL3	Q5VVW2	1013 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZDHHC20	Q5W0Z9	365 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CAVIN1	Q6NZI2	390 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	LRRC8B	Q6P9F7	803 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	DNM1P46	Q6ZS02	220 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	RBM43	Q6ZSC3	357 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	H2AFV	Q71UI9	128 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	TBC1D21	Q8IYX1	336 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF611	Q8N823	705 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF398	Q8TD17	642 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	DTX3L	Q8TDB6	740 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZFAND2B	Q8WV99	257 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	MAML1	Q92585	1016 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	GTPBP3	Q969Y2	492 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CCDC42	Q96M95	316 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	TRIB3	Q96RU7	358 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	DEFB126	Q9BYW3	111 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	PHACTR1	Q9C0D0	580 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	IL1RL2	Q9HB29	575 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CTTNBP2NL	Q9P2B4	639 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	UVRAG	Q9P2Y5	699 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	INTU	Q9ULD6	942 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	RUVBL1	Q9Y265	456 aa	Known RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	PCDHGB3	Q9Y5G1	929 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	WIF1	Q9Y5W5	379 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	CMYA5	Q8N3K9	4069 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	VWF	P04275	2813 aa		4.96	□□□□□ -1.61
SEC13-219	ENST00000492602		A0A096LNT2	108 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM157A	C9JC47	383 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602		H0YGG7	62 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	LINC01387	J3KSC0	135 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	AKR1B10	O60218	316 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	NDUFS7	O75251	213 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF189	O75820	626 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	AP2A1	O95782	977 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	S1PR4	O95977	384 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	IL18BP	O95998	194 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	IGHV4-39	P01824	125 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CYC1	P08574	325 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CCDC166	P0CW27	439 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	IGHV4-31	P0DP07	118 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CD9	P21926	228 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	DPP4	P27487	766 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	LOX	P28300	417 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PKLR	P30613	574 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	GJC1	P36383	396 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ARHGAP25	P42331	645 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	AVPR1B	P47901	424 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	EMP3	P54852	163 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	OR4D2	P58180	307 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ARF3	P61204	181 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	LOXL1	Q08397	574 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM27E3	Q08E93	113 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	RPA4	Q13156	261 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PTK6	Q13882	451 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	NR1I3	Q14994	352 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ABRAXAS2	Q15018	415 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PDK1	Q15118	436 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	HKDC1	Q2TB90	917 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM166A	Q6J272	317 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ALKBH5	Q6P6C2	394 aa	Known RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	GK5	Q6ZS86	529 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	POLN	Q7Z5Q5	900 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC26A11	Q86WA9	606 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms