RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 I3L1I5 382 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 C8GP07360 202 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 SLC35E2BP0CK96 405 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 PYGBP11216 843 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 NPPBP16860 134 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 FBLP22087 321 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ATP6V0D1P61421 351 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 CSNK1G2P78368 415 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 MAT1AQ00266 395 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 SP140Q13342 867 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 NAE1Q13564 534 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 RBBP7Q16576 425 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 THEMIS2Q5TEJ8 643 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 TIFABQ6ZNK6 161 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 Q6ZS92 163 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 PRSS41Q7RTY9 318 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 CUZD1Q86UP6 607 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ATCAYQ86WG3 371 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ZC3H7AQ8IWR0 971 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ACMSDQ8TDX5 336 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ANKRD49Q8WVL7 239 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 MIEF2Q96C03 454 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 MVB12AQ96EY5 273 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 PDLIM5Q96HC4 596 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 SCYL1Q96KG9 808 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 OR4K3Q96R72 315 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 UNKQ9C0B0 810 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 DERL2Q9GZP9 239 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 CCDC177Q9NQR7 707 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 TMEM184CQ9NVA4 438 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 TRPC4Q9UBN4 977 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 LGALS13Q9UHV8 139 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 C3orf18Q9UK00 162 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 G3BP2Q9UN86 482 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 B3GNT3Q9Y2A9 372 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 NTNG1Q9Y2I2 539 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 DOPEY1Q5JWR5 2465 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 TEX15Q9BXT5 2789 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 A0A1W2PPM1 405 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 A0A1W2PQ72 361 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 FEZF1A0PJY2 475 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 NPEPPSL1A6NEC2 478 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 IDSB3KWA1 339 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 SLC16A5O15375 505 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 LCMT2O60294 686 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 ALPPP05187 535 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 COX6A1P12074 109 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 ITGA3P26006 1051 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 BCL6P41182 706 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 IRF9Q00978 393 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 OCA2Q04671 838 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 TUBB8Q3ZCM7 444 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 GARNL3Q5VVW2 1013 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 SBSNQ6UWP8 590 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 ADAMTSL2Q86TH1 951 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 SRRM1Q8IYB3 904 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 CYP4X1Q8N118 509 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 OR9A4Q8NGU2 314 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 PSMF1Q92530 271 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 ISL2Q96A47 359 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 PYCR2Q96C36 320 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 TM4SF19Q96DZ7 209 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 MMABQ96EY8 250 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 BARD1Q99728 777 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 TGIF2Q9GZN2 237 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 DRC3Q9H069 523 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 IQCGQ9H095 443 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 SLAMF7Q9NQ25 335 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 CDC14AQ9UNH5 594 aa12.03□□□□□ -0.48
SEC61A1-206ENST00000491668 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.48
SEC61A1-206ENST00000491668 CDC7O00311 574 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 JRKO75564 520 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 KLHL18O94889 574 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 KLHL2O95198 593 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 HPP00738 406 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 S100BP04271 92 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 RNF224P0DH78 156 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 COL6A2P12110 1019 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 CDH1P12830 882 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ACPPP15309 386 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 CD1DP15813 335 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 KRT4P19013 534 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms