RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ACTRT2Q8TDY3 377 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 KLHL6Q8WZ60 621 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 RILPQ96NA2 401 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 MS4A8Q9BY19 250 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 VPS29Q9UBQ0 182 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 GIMAP2Q9UG22 337 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 LOC105369274A0A096LPK9 316 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 LOC102723532A0A0G2JNH3 316 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 SH3BGRLO75368 114 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 RSL1D1O76021 490 aaKnown RBP20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 STATHP02808 62 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 SERPIND1P05546 499 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 PRR35P0CG20 571 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 ARL4DP49703 201 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 TUBB3Q13509 450 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 ATP6AP1LQ52LC2 224 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 NXNQ6DKJ4 435 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 ARHGAP22Q7Z5H3 698 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 ASPGQ86U10 573 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 OR4N4Q8N0Y3 316 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 CEP70Q8NHQ1 597 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 SLC13A3Q8WWT9 602 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 RERGQ96A58 199 aaPredicted RBP20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 CCDC74BQ96LY2 380 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 OR51B5Q9H339 312 aa20.76■□□□□ 0.91
VCPKMT-204ENST00000491402 H0YGG7 62 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 PEX11AO75192 247 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 NELFEP18615 380 aaKnown RBP20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 PRPH2P23942 346 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 ID4P47928 161 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 ARF3P61204 181 aaPredicted RBP20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 E2F1Q01094 437 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 KCNAB1Q14722 419 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 GALNTL6Q49A17 601 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 SPDYAQ5MJ70 313 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 D2HGDHQ8N465 521 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 RCBTB1Q8NDN9 531 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 CMTM7Q96FZ5 175 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 PPP3R2Q96LZ3 170 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 MACROD1Q9BQ69 325 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 CCDC28BQ9BUN5 200 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 ARL2BPQ9Y2Y0 163 aa20.75■□□□□ 0.91
VCPKMT-204ENST00000491402 NPIPB8E9PQR5 432 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 DKK1O94907 266 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 SERPINA6P08185 405 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 SLC35G6P0C7Q6 338 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 PTX3P26022 381 aaPredicted RBP20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 GABRA4P48169 554 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 CLDN6P56747 220 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 HYAL2Q12891 473 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 PWP1Q13610 501 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 CUL3Q13618 768 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 AP5B1Q2VPB7 878 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 KHDRBS2Q5VWX1 349 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 MCATQ8IVS2 390 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 TM4SF19Q96DZ7 209 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 SERPINI1Q99574 410 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 SPTBP11277 2137 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 LRIT2A6NDA9 550 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 E9PBE3 544 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 P2RX6O15547 441 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 KLHL41O60662 606 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 HNRNPH1P31943 449 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 PDX1P52945 283 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 C6orf136Q5SQH8 315 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 PHF19Q5T6S3 580 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 CCDC197Q8NCU1 140 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 MRPL1Q9BYD6 325 aaKnown RBP20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 LRTM1Q9HBL6 345 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 NMRK1Q9NWW6 199 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 C1orf109Q9NX04 203 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 PLCL2Q9UPR0 1127 aa20.74■□□□□ 0.91
VCPKMT-204ENST00000491402 EIF2S1P05198 315 aaKnown RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 LBPP18428 481 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 VSX2P58304 361 aaPredicted RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 INSM1Q01101 510 aaPredicted RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 ZFP36L1Q07352 338 aaKnown RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 RFTN2Q52LD8 501 aaPredicted RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 DEPDC1Q5TB30 811 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 TMEM198Q66K66 360 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 CHSY3Q70JA7 882 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 B3GNT8Q7Z7M8 397 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 CACNA2D3Q8IZS8 1091 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 FNDC5Q8NAU1 212 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 CAMKVQ8NCB2 501 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 NT5CQ8TCD5 201 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 APIPQ96GX9 242 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 F2RL3Q96RI0 385 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 SLC6A16Q9GZN6 736 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 REXO4Q9GZR2 422 aaKnown RBP20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 AICDAQ9GZX7 198 aa20.73■□□□□ 0.91
VCPKMT-204ENST00000491402 SAP18O00422 153 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 SRPX2O60687 465 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 SEC22BO75396 215 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 MSL3P1P0C860 447 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 RPL38P63173 70 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 RGS1Q08116 209 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 TBL3Q12788 808 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 KIAA0040Q15053 153 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 TERF2Q15554 542 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms