RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MOCS2O96007 188 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 RLN1P04808 185 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 LBPP18428 481 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 UGT1A4P22310 534 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 HNF4AP41235 474 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TAZQ16635 292 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 MOGAT2Q3SYC2 334 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 ATP1A1-AS1Q5TC04 95 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM46CQ5VWP2 391 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 SUSD4Q5VX71 490 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM166AQ6J272 317 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 CASC4Q6P4E1 433 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZNF613Q6PF04 617 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRUNE1Q86TP1 453 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 APCDD1Q8J025 514 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 SIX6OS1Q8N1H7 587 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 CARNMT1Q8N4J0 409 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZNF300Q96RE9 604 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 VGLL1Q99990 258 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 CABLES2Q9BTV7 478 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 UBXN6Q9BZV1 441 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TSPY26PQ9H489 355 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 MINDY3Q9H8M7 445 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 PHPT1Q9NRX4 125 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TMOD3Q9NYL9 352 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 NUDT4Q9NZJ9 180 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 THEGQ9P2T0 379 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 POLKQ9UBT6 870 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 AGTPBP1Q9UPW5 1226 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 NCKAP1Q9Y2A7 1128 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 NSG2Q9Y328 171 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 MOB4Q9Y3A3 225 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZSCAN5DPP0CG00 497 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 STMN1P16949 149 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 RBMS1P29558 406 aaKnown RBP4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 TMEM50BP56557 158 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 PTENP60484 403 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 IRX4P78413 519 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 RBP5P82980 135 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 DHODHQ02127 395 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 PTK6Q13882 451 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 MTF1Q14872 753 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 GLIPR1L2Q4G1C9 344 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 TAF1BQ53T94 588 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 C2CD6Q53TS8 623 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 ODF2Q5BJF6 829 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 PLBD1Q6P4A8 553 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 DCLRE1AQ6PJP8 1040 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 DOK6Q6PKX4 331 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 FRRS1Q6ZNA5 592 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 CATSPER4Q7RTX7 472 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 ANKRD33Q7Z3H0 272 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 CPEB2Q7Z5Q1 589 aaKnown RBP4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 KRTAP7-1Q8IUC3 87 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 METTL4Q8N3J2 472 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 RIT1Q92963 219 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 OMA1Q96E52 524 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 RBM41Q96IZ5 413 aaKnown RBP4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 CCDC114Q96M63 670 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 IL12RB2Q99665 862 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 DESI2Q9BSY9 194 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 C10orf88Q9H8K7 445 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 FBXL4Q9UKA2 621 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 PILRBQ9UKJ0 227 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 ITGA11Q9UKX5 1188 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 MYH15Q9Y2K3 1946 aa4.15□□□□□ -1.75
HMGB1P38-201ENST00000490557 IQCMA0A1B0GVH7 501 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 TRIM64CA6NLI5 447 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 PRSS46E5RG02 174 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NPIPA3F8WFD2 350 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 TGDSO95455 350 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 TPM2P07951 284 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 SP9P0CG40 484 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 EEF2P13639 858 aaKnown RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 PSMB4P28070 264 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 PDHA2P29803 388 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 ATP5DP30049 168 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NPBWR1P48145 328 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 GMPSP49915 693 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 GSCP56915 257 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 BFSP1Q12934 665 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 DUSP5Q16690 384 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 ZNF542PQ5EBM4 170 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 LCLAT1Q6UWP7 414 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 BTNL8Q6UX41 500 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 MSANTD1Q6ZTZ1 278 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 RAPH1Q70E73 1250 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 CATSPERDQ86XM0 798 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 OCC1Q8TAD7 63 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 ATP8B4Q8TF62 1192 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 DNASE1L2Q92874 299 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NXPE2Q96DL1 559 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NEDD4LQ96PU5 975 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 GPATCH1Q9BRR8 931 aaKnown RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 ALKBH7Q9BT30 221 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 PI4K2AQ9BTU6 479 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 ABCG4Q9H172 646 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms