RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ITGA1P56199 1179 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 RPS13P62277 151 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 CSTF3Q12996 717 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 TARDBPQ13148 414 aaKnown RBP eCLIP10.39□□□□□ -0.75
TFF3-203ENST00000489676 PWP1Q13610 501 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 DDX39BQ13838 428 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 TCTE1Q5JU00 501 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 WASHC2DQ5SRD0 308 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 TMTC4Q5T4D3 741 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 CGB2Q6NT52 195 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 TMEM214Q6NUQ4 689 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 RAB11FIP2Q7L804 512 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 MARCH9Q86YJ5 346 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 GALNT15Q8N3T1 639 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 CSNK1A1LQ8N752 337 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 CAMKVQ8NCB2 501 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 TRPV3Q8NET8 790 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 OR2T11Q8NH01 316 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 OR8K5Q8NH50 307 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 PIWIL2Q8TC59 973 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 SLC13A3Q8WWT9 602 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 SELENOMQ8WWX9 145 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 PMEPA1Q969W9 287 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 FAR2Q96K12 515 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 OR6C1Q96RD1 312 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 CMKLR1Q99788 373 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 MACROD1Q9BQ69 325 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 SPRTNQ9H040 489 aaPredicted RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 BRF2Q9HAW0 419 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 LHX9Q9NQ69 397 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 FBXO8Q9NRD0 319 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 PSD3Q9NYI0 1048 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 WASF3Q9UPY6 502 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 MRPS2Q9Y399 296 aaKnown RBP10.39□□□□□ -0.75
TFF3-203ENST00000489676 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
TFF3-203ENST00000489676 FRYQ5TBA9 3013 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 FAM149AA5PLN7 773 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 LRIT2A6NDA9 550 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 ANKDD1BA6NHY2 528 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 AGRPO00253 132 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 PLD2O14939 933 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 HDAC3O15379 428 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 ZSCAN9O15535 394 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 MAP3K7O43318 606 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 SHOX2O60902 331 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 ULK1O75385 1050 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 SKAP2O75563 359 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 CRCPO75575 148 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 SEMA3DO95025 777 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 SLC35G6P0C7Q6 338 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 ITIH1P19827 911 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 PRPH2P23942 346 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 LSP1P33241 339 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 HK2P52789 917 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 EMP3P54852 163 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 BTKQ06187 659 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 CUL3Q13618 768 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 IL11RAQ14626 422 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
TFF3-203ENST00000489676 MANEAQ5SRI9 462 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 KHDRBS2Q5VWX1 349 aaKnown RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 SCIMPQ6UWF3 145 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 Q6ZSR9 355 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 UBE3DQ7Z6J8 389 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 CRLF3Q8IUI8 442 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 HOMEZQ8IX15 550 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 LRRC34Q8IZ02 419 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 AFAP1L2Q8N4X5 818 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 GBP7Q8N8V2 638 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 KCT2Q8NC54 265 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 GAL3ST3Q96A11 431 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 RERGQ96A58 199 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 MS4A6EQ96DS6 147 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 C19orf60Q96EN9 201 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 C11orf24Q96F05 449 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 CMTM7Q96FZ5 175 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 C3orf30Q96M34 536 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 ZNF717Q9BY31 904 aaPredicted RBP10.38□□□□□ -0.75
TFF3-203ENST00000489676 FANCEQ9HB96 536 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 STARD5Q9NSY2 213 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 FGFR1OP2Q9NVK5 253 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 PCDHGA8Q9Y5G5 932 aa10.38□□□□□ -0.75
TFF3-203ENST00000489676 BAHCC1Q9P281 2608 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 SLCO1B7G3V0H7 640 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 SDHDO14521 159 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 TXNDC9O14530 226 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 OR2B3O76000 313 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 SCELO95171 688 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 TGDSO95455 350 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 CHEK2O96017 543 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 TGFB1P01137 390 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 EIF2S1P05198 315 aaKnown RBP10.37□□□□□ -0.75
TFF3-203ENST00000489676 PRR35P0CG20 571 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 SMIM10L1P0DMW3 83 aa10.37□□□□□ -0.75
TFF3-203ENST00000489676 ARFIP1P53367 373 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms