RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CA9Q16790 459 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 HLA-BQ31612 363 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 MCMDC2Q4G0Z9 681 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ERMARDQ5T6L9 678 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 SLC30A6Q6NXT4 461 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 RTN4RL2Q86UN3 420 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ZNF595Q8IYB9 648 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 LGI2Q8N0V4 545 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 THAP8Q8NA92 274 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 RAET1EQ8TD07 263 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ROBO4Q8WZ75 1007 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 USP28Q96RU2 1077 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 EGFL8Q99944 293 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 CLEC7AQ9BXN2 247 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 TMX4Q9H1E5 349 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-214ENST00000488427 CNOT10Q9H9A5 744 aaKnown RBP3.81□□□□□ -1.8
ITGB1-214ENST00000488427 CDH20Q9HBT6 801 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 PLCXD1Q9NUJ7 323 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 EPHA6Q9UF33 1036 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 TNNQ9UQP3 1299 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 OTOFQ9HC10 1997 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 PSME4Q14997 1843 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 A0A0J9YWU9 116 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 ANTXRLA6NF34 631 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 KPNA7A9QM74 516 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 H0YAE9 185 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 FIBPO43427 364 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 EXTL3O43909 919 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 KHDRBS3O75525 346 aaKnown RBP3.8□□□□□ -1.8
ITGB1-214ENST00000488427 ERCC2P18074 760 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 IL11P20809 199 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 NF2P35240 595 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 CCR10P46092 362 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 LHX1P48742 406 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 CYCSP99999 105 aaKnown RBP3.8□□□□□ -1.8
ITGB1-214ENST00000488427 MYL7Q01449 175 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 SGCGQ13326 291 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 TMEM187Q14656 261 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 ZBTB49Q6ZSB9 765 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 Q6ZSR9 355 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 CHST3Q7LGC8 479 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 TMPRSS11BQ86T26 416 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 ZNF485Q8NCK3 441 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 PRSS33Q8NF86 280 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 KBTBD8Q8NFY9 601 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 OR11H4Q8NGC9 324 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 OR4C3Q8NH37 302 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 MAPK15Q8TD08 544 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 SNRNP27Q8WVK2 155 aaKnown RBP3.8□□□□□ -1.8
ITGB1-214ENST00000488427 ZNRF4Q8WWF5 429 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 AGAP3Q96P47 875 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 DEFB118Q96PH6 123 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 FGFBP2Q9BYJ0 223 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 OR2B2Q9GZK3 357 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 PRMT7Q9NVM4 692 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-214ENST00000488427 TXNDC16Q9P2K2 825 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 CACNG5Q9UF02 275 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 RASAL2Q9UJF2 1139 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 RPS6KL1Q9Y6S9 549 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 COL4A6Q14031 1691 aa3.8□□□□□ -1.8
ITGB1-214ENST00000488427 TRIOO75962 3097 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 ANKRD17O75179 2603 aaKnown RBP3.79□□□□□ -1.8
ITGB1-214ENST00000488427 BPTFQ12830 3046 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 TECTAO75443 2155 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 RPS6KA5O75582 802 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 VTNP04004 478 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 GPIP06744 558 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 JAK1P23458 1154 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 HOXD10P28358 340 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 TSFMP43897 325 aaKnown RBP3.79□□□□□ -1.8
ITGB1-214ENST00000488427 PAX9P55771 341 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 NUCB1Q02818 461 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 SHHQ15465 462 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 VWC2Q2TAL6 325 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 CTU2Q2VPK5 515 aaKnown RBP3.79□□□□□ -1.8
ITGB1-214ENST00000488427 UGT3A2Q3SY77 523 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 XKR6Q5GH73 641 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 NOTUMQ6P988 496 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 NUP54Q7Z3B4 507 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 HOGA1Q86XE5 327 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 CCDC89Q8N998 374 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 OR4K1Q8NGD4 311 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 POM121L2Q96KW2 1035 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 LRRC3BQ96PB8 259 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 TRIM15Q9C019 465 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 TBC1D7Q9P0N9 293 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 CHKBQ9Y259 395 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 FRMPD3Q5JV73 1810 aa3.79□□□□□ -1.8
ITGB1-214ENST00000488427 SCN9AQ15858 1988 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 SNX3O60493 162 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 GGPS1O95749 300 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 SMIM18P0DKX4 95 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 SLC2A2P11168 524 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-214ENST00000488427 EPCAMP16422 314 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 PTPN3P26045 913 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms