RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 KBTBD8Q8NFY9 601 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 OR13C3Q8NGS6 347 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 OR52N5Q8NH56 324 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 CKAP2Q8WWK9 683 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 AP2M1Q96CW1 435 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 SNRNP40Q96DI7 357 aaKnown RBP4.33□□□□□ -1.72
SRRM1-215ENST00000488317 MAP3K3Q99759 626 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 IDI2Q9BXS1 227 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 API5Q9BZZ5 524 aaKnown RBP4.33□□□□□ -1.72
SRRM1-215ENST00000488317 CUEDC2Q9H467 287 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 THAP9Q9H5L6 903 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 PHPT1Q9NRX4 125 aaPredicted RBP4.33□□□□□ -1.72
SRRM1-215ENST00000488317 SPG21Q9NZD8 308 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 GPR132Q9UNW8 380 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 PCDHGA1Q9Y5H4 931 aa4.33□□□□□ -1.72
SRRM1-215ENST00000488317 DDX49Q9Y6V7 483 aaKnown RBP4.33□□□□□ -1.72
SRRM1-215ENST00000488317 USP54Q70EL1 1684 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 CPS1P31327 1500 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 EDC4Q6P2E9 1401 aaKnown RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 RIMS2Q9UQ26 1411 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ARHGEF10O15013 1369 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 BICDL2A1A5D9 508 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ACOT8O14734 319 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 AKAP3O75969 853 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 GLCEO94923 617 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 REC8O95072 547 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 APOHP02749 345 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 FGF3P11487 239 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 VCLP18206 1134 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 LHCGRP22888 699 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 CA6P23280 308 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ALDH1B1P30837 517 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 FHL1Q13642 323 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 SQLEQ14534 574 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 HERC3Q15034 1050 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 MAPK11Q15759 364 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 CAPRIN2Q6IMN6 1127 aaKnown RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 SASS6Q6UVJ0 657 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 GDPD4Q6W3E5 623 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 RBM23Q86U06 439 aaKnown RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ISCA2Q86U28 154 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 NFE4Q86UQ8 179 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ZDHHC17Q8IUH5 632 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 SIAH3Q8IW03 269 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 SAMD14Q8IZD0 417 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 FAM184AQ8NB25 1140 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 OR8H1Q8NGG4 311 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 SYAP1Q96A49 352 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-215ENST00000488317 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 NDNQ99608 321 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 C17orf62Q9BQA9 187 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 OSBPL8Q9BZF1 889 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 MTMR12Q9C0I1 747 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 OR2B2Q9GZK3 357 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 R4GN57 208 aa4.32□□□□□ -1.72
SRRM1-215ENST00000488317 PXDNLA1KZ92 1463 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 KIAA0232Q92628 1395 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 SYCE3A1L190 88 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 C17orf105B2RV13 164 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 PGRMC2O15173 223 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ATP6V0E1O15342 81 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 BUB3O43684 328 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 HTATSF1O43719 755 aaKnown RBP4.31□□□□□ -1.72
SRRM1-215ENST00000488317 DDHD2O94830 711 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 CRYAAP02489 173 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ZNF853P0CG23 659 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 IGHV4-38-2P0DP08 117 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 TGFB3P10600 412 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 LIFP15018 202 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ALDH4A1P30038 563 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 MAGEB1P43366 347 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 TNNT2P45379 298 aaPredicted RBP4.31□□□□□ -1.72
SRRM1-215ENST00000488317 IER3P46695 156 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 NT5C2P49902 561 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 SERPINH1P50454 418 aaKnown RBP4.31□□□□□ -1.72
SRRM1-215ENST00000488317 RIPK4P57078 832 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 HERV-K104P61576 105 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 HMGN5P82970 282 aaKnown RBP4.31□□□□□ -1.72
SRRM1-215ENST00000488317 GCNT1Q02742 428 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 CETN1Q12798 172 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ABRQ12979 859 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 LASP1Q14847 261 aaKnown RBP4.31□□□□□ -1.72
SRRM1-215ENST00000488317 OPCMLQ14982 345 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 RPS6KA1Q15418 735 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 SGCBQ16585 318 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ACCSLQ4AC99 568 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 XKR3Q5GH77 459 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 TECRLQ5HYJ1 363 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 C9orf139Q6ZV77 190 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ANKRD33Q7Z3H0 272 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 SFRP1Q8N474 314 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 ALG14Q96F25 216 aa4.31□□□□□ -1.72
SRRM1-215ENST00000488317 PANX3Q96QZ0 392 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms