RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FAM199XQ6PEV8 388 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 VN1R4Q7Z5H5 301 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 C10orf107Q8IVU9 208 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 ANKRD53Q8N9V6 530 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 PPP1R14CQ8TAE6 165 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 ZCCHC10Q8TBK6 192 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 COL26A1Q96A83 441 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TM4SF19Q96DZ7 209 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 L3HYPDHQ96EM0 354 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 SEC16BQ96JE7 1060 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 PAIP2Q9BPZ3 127 aaKnown RBP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 NTMT1Q9BV86 223 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 YIPF2Q9BWQ6 316 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 GPN2Q9H9Y4 310 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 ACSS2Q9NR19 701 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 IFT80Q9P2H3 777 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 ADGRE2Q9UHX3 823 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 RNF11Q9Y3C5 154 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TM9SF1O15321 606 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 P2RX6O15547 441 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 PRPF4O43172 522 aaKnown RBP eCLIP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 PRAMEF4O60810 478 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 CRCPO75575 148 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 SERPINA6P08185 405 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 CD63P08962 238 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 SERPINB1P30740 379 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 RORAP35398 523 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 DLSTP36957 453 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 STAT5AP42229 794 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 UCNP55089 124 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 STXBP1P61764 594 aaKnown RBP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 SKP1P63208 163 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 IFT88Q13099 833 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 DDX39BQ13838 428 aaKnown RBP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 TOR1AIP1Q5JTV8 583 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 HHATQ5VTY9 493 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 PRAMEF9Q5VWM5 478 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 PRMT9Q6P2P2 845 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ABHD13Q7L211 337 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 METTL27Q8N6F8 245 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ANKRD42Q8N9B4 389 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 KCT2Q8NC54 265 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 OR52B6Q8NGF0 335 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 NT5CQ8TCD5 201 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 MMABQ96EY8 250 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 FAR2Q96K12 515 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 CDK15Q96Q40 435 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 CHST8Q9H2A9 424 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 SYNPO2LQ9H987 977 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ANKHQ9HCJ1 492 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ZBTB26Q9HCK0 441 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF304Q9HCX3 659 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ENAMQ9NRM1 1142 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 NKIRAS1Q9NYS0 192 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 KCND3Q9UK17 655 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 CROTQ9UKG9 612 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF490Q9ULM2 529 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-219ENST00000488186 MAU2Q9Y6X3 613 aa14.98□□□□□ -0.01
C9orf3-219ENST00000488186 LOC101059948A0A1B0GTJ6 334 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 AGPSO00116 658 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CLEC3AO75596 197 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 SPTBP11277 2137 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CD22P20273 847 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 ALDH3A1P30838 453 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 OR1D4P47884 311 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 TGM3Q08188 693 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 LCP2Q13094 533 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 FAM53BQ14153 422 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 SLC9A5Q14940 896 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 PCLAFQ15004 111 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 HERC3Q15034 1050 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 ZRSR2Q15696 482 aaKnown RBP14.97□□□□□ -0.01
C9orf3-219ENST00000488186 NKAIN1Q4KMZ8 207 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 ARHGAP40Q5TG30 622 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 TMEM214Q6NUQ4 689 aaKnown RBP14.97□□□□□ -0.01
C9orf3-219ENST00000488186 NIPAL1Q6NVV3 410 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 GPRIN3Q6ZVF9 776 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CHSY3Q70JA7 882 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 VASH2Q86V25 355 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 NUDCD3Q8IVD9 361 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 LAS2Q8IYD9 372 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 L3MBTL4Q8NA19 623 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 ZSCAN1Q8NBB4 408 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 OR7G3Q8NG95 312 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 OR4F6Q8NGB9 312 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CT55Q8WUE5 264 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 MTFMTQ96DP5 389 aaKnown RBP14.97□□□□□ -0.01
C9orf3-219ENST00000488186 MOCOSQ96EN8 888 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 MVB12AQ96EY5 273 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 GBP5Q96PP8 586 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CCNL2Q96S94 520 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CENPKQ9BS16 269 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 RHBGQ9H310 441 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 SNX6Q9UNH7 406 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 CFAP47Q6ZTR5 3102 aa14.97□□□□□ -0.01
C9orf3-219ENST00000488186 A0A088AWK7 358 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 A0A0A6YYC8 382 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 WDR91A4D1P6 747 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 C21orf140B9A014 251 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms