RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KBTBD13C9JR72 458 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 F8VVB4 439 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 F8VWA3 439 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 ZNF197O14709 1029 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 GH1P01241 217 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 IGHV4-59P01825 116 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 LHCGRP22888 699 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 LINC01547P58512 204 aaPredicted RBP4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 GPR17Q13304 367 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 P2RY6Q15077 328 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 KBTBD12Q3ZCT8 623 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 IQCCQ4KMZ1 466 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 CTR9Q6PD62 1173 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 PODNL1Q6PEZ8 512 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 PIGZQ86VD9 579 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 CLYBLQ8N0X4 340 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 NCOA7Q8NI08 942 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 KLHL5Q96PQ7 755 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 CTAGE1Q96RT6 745 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 EPYCQ99645 322 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 CACNG6Q9BXT2 260 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 SDCBP2Q9H190 292 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 MMP28Q9H239 520 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 SRD5A3Q9H8P0 318 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 IL1RAPL2Q9NP60 686 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 SIX2Q9NPC8 291 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 INTS9Q9NV88 658 aaKnown RBP4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 DNAJC17Q9NVM6 304 aaKnown RBP4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 ADPRHL2Q9NX46 363 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 SLCO1C1Q9NYB5 712 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 HBS1LQ9Y450 684 aaKnown RBP4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 R4GN57 208 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 WDR90Q96KV7 1748 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 PIK3C2AO00443 1686 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 TRIM64A6NGJ6 449 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 TRIM64BA6NI03 449 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 TMEM150CB9EJG8 249 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC22A3O75751 556 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 DFFBO76075 338 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 BAG3O95817 575 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC16A8O95907 504 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 PRSS1P07477 247 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 GP1BBP13224 206 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 NPBWR1P48145 328 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SNU13P55769 128 aaKnown RBP4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 STX1BP61266 288 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 HERV-K104P61576 105 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 CDR2Q01850 454 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 MORF4L2Q15014 288 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 GPR33Q49SQ1 333 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 STPG1Q5TH74 334 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 FAM46CQ5VWP2 391 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC35E4Q6ICL7 350 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 TMEM270Q6UE05 265 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 CROCCP3Q8IVE0 287 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 OR13C3Q8NGS6 347 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 LRRC8CQ8TDW0 803 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC26A7Q8TE54 656 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 UBLCP1Q8WVY7 318 aaPredicted RBP4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 KRT35Q92764 455 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 MRPL9Q9BYD2 267 aaKnown RBP4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 FBXL5Q9UKA1 691 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 KLK4Q9Y5K2 254 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 GPRASP1Q5JY77 1395 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 MAP3K5Q99683 1374 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 COL18A1P39060 1754 aa4.47□□□□□ -1.69
PRPF38A-203ENST00000487160 ACEP12821 1306 aa4.46□□□□□ -1.69
PRPF38A-203ENST00000487160 COL5A2P05997 1499 aaPredicted RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 SMIM30A4D0T7 59 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 O00370 1275 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 FPGTO14772 594 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 F3P13726 295 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 ITGA3P26006 1051 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 ALDH4A1P30038 563 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 SSTR1P30872 391 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 DUTP33316 252 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 SFTPDP35247 375 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 HNF4AP41235 474 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 OR3A1P47881 315 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 PHEXP78562 749 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 IL10RBQ08334 325 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 OPCMLQ14982 345 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 UGT3A1Q6NUS8 523 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 TTC27Q6P3X3 843 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 MARK2Q7KZI7 788 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 KCTD9Q7L273 389 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 TRMT1LQ7Z2T5 733 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 ANKRD46Q86W74 232 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 AMER3Q8N944 861 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 NAT8LQ8N9F0 302 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 OR4C3Q8NH37 302 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 HPSE2Q8WWQ2 592 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 CENPTQ96BT3 561 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms