RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 PRSS41Q7RTY9 318 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 SLC22A9Q8IVM8 553 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 IQCKQ8N0W5 287 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 ARHGEF39Q8N4T4 335 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 BANPQ8N9N5 519 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TRPV3Q8NET8 790 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TTLQ8NG68 377 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 OR9A4Q8NGU2 314 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 PPP4R1Q8TF05 950 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TMEM237Q96Q45 408 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 SMC6Q96SB8 1091 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 YIPF2Q9BWQ6 316 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 NOL11Q9H8H0 719 aaKnown RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 ANKHQ9HCJ1 492 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 SLC22A11Q9NSA0 550 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CTSFQ9UBX1 484 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CDC14AQ9UNH5 594 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 PADI2Q9Y2J8 665 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 PCDHGA6Q9Y5G7 932 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CCDC88CQ9P219 2028 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CDC14CA4D256 554 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 G3V2L1 256 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 OR7A17O14581 309 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
HPS4-214ENST00000485842 CNOT3O75175 753 aaKnown RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 SH3BGRLO75368 114 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CREG1O75629 220 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 WFS1O76024 890 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 SUPT7LO94864 414 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 KLHL18O94889 574 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 B3GALT4O96024 378 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 FOLR3P41439 243 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CASP2P42575 452 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CDH13P55290 713 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 HERVK_113P63132 956 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MAT1AQ00266 395 aaKnown RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 MC1RQ01726 317 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CDC20Q12834 499 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 PWP1Q13610 501 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 DDX39BQ13838 428 aaKnown RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 DSG2Q14126 1118 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 FAM53BQ14153 422 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ERV3-1Q14264 604 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 DEFB134Q4QY38 66 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MED27Q6P2C8 311 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ZYG11AQ6WRX3 759 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 SHISA6Q6ZSJ9 500 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 COX15Q7KZN9 410 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 SYVN1Q86TM6 617 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CCNYL1Q8N7R7 359 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 OR52B6Q8NGF0 335 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 TRPC4APQ8TEL6 797 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CREB3L4Q8TEY5 395 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 UBE2E3Q969T4 207 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 FKBP10Q96AY3 582 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MVB12AQ96EY5 273 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 CDK15Q96Q40 435 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ERVK-6Q9BXR3 956 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 PITHD1Q9GZP4 211 aaPredicted RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 PRORYQ9H606 182 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 NT5DC2Q9H857 520 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ZBTB26Q9HCK0 441 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MKS1Q9NXB0 559 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 HCN3Q9P1Z3 774 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 SLC17A7Q9P2U7 560 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 TRPC4Q9UBN4 977 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 TCFL5Q9UL49 500 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 ZNF490Q9ULM2 529 aaPredicted RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 RNF11Q9Y3C5 154 aa11.25□□□□□ -0.61
HPS4-214ENST00000485842 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
HPS4-214ENST00000485842 A0A0G2JN53 185 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 URADA6NGE7 173 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 C4orf51C9J302 202 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 SGK494L7N484 410 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 RDH16O75452 317 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 CLEC3AO75596 197 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 NSA2O95478 260 aaKnown RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 CLDN9O95484 217 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 SERPINA6P08185 405 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 CPA3P15088 417 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 CREB1P16220 341 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 ALOX12P18054 663 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 GSTM2P28161 218 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 PRKAA2P54646 552 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 RAB8AP61006 207 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 STXBP1P61764 594 aaKnown RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 HYAL2Q12891 473 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 TRAF3Q13114 568 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 IL10RAQ13651 578 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 E2F2Q14209 437 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 HERC3Q15034 1050 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms