RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 VMP1Q96GC9 406 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 PDLIM5Q96HC4 596 aaKnown RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 GMPPAQ96IJ6 420 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 TSSK2Q96PF2 358 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 OVOL2Q9BRP0 275 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 ALKBH7Q9BT30 221 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 UTP14AQ9BVJ6 771 aaKnown RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 LSG1Q9H089 658 aaKnown RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 PANK4Q9NVE7 773 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 ATAD3AQ9NVI7 634 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 ARGLU1Q9NWB6 273 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 MIS18AQ9NYP9 233 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 CACNG5Q9UF02 275 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 ARMCX3Q9UH62 379 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 FBXL4Q9UKA2 621 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 PRDM4Q9UKN5 801 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 ELF5Q9UKW6 265 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-213ENST00000484088 AGTPBP1Q9UPW5 1226 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 KNSTRNQ9Y448 316 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 SNED1Q8TER0 1413 aa1.97□□□□□ -2.09
ITGB1-213ENST00000484088 PFASO15067 1338 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 FANCIQ9NVI1 1328 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TRAV18A0A075B6X5 111 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 A0A087X0K7 114 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 A0A0G2JLW4 131 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SMIM30A4D0T7 59 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 C5orf51A6NDU8 294 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SHISA7A6NL88 538 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 KBTBD13C9JR72 458 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 NPIPB9F8W1W9 429 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SLCO1B7G3V0H7 640 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 RTCAO00442 366 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 CTAGE5O15320 804 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 KINO60870 393 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 GLCEO94923 617 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 YES1P07947 543 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SP9P0CG40 484 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SLC2A2P11168 524 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 MYOGP15173 224 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 VCLP18206 1134 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SSTR1P30872 391 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 OPRL1P41146 370 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TDO2P48775 406 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 XGP55808 180 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 CLDN17P56750 224 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ST8SIA6P61647 398 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ARHGAP1Q07960 439 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 WASHC5Q12768 1159 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TMEM187Q14656 261 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TMEM132DQ14C87 1099 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 EFTUD2Q15029 972 aaKnown RBP eCLIP1.96□□□□□ -2.11e-6■■■■■ 49.2
ITGB1-213ENST00000484088 DUSP5Q16690 384 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 MRGPRG-AS1Q2M3A8 158 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 HFEQ30201 348 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF789Q5FWF6 425 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ARHGEF16Q5VV41 709 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 PM20D1Q6GTS8 502 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TTC27Q6P3X3 843 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 IYDQ6PHW0 289 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 DHRS11Q6UWP2 260 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SIGLEC15Q6ZMC9 328 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SLC24A5Q71RS6 500 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 PTAR1Q7Z6K3 402 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 DZIP1Q86YF9 867 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 KLHDC8AQ8IYD2 350 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ARL6IP6Q8N6S5 226 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TMEM178AQ8NBL3 297 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 C11orf45Q8TAV5 145 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 AFAP1L1Q8TED9 768 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SMAP2Q8WU79 429 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 NXPE2Q96DL1 559 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 PGM2Q96G03 612 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF486Q96H40 463 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 CDHR1Q96JP9 859 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 LURAP1Q96LR2 239 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 NECTIN4Q96NY8 510 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 PANX3Q96QZ0 392 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF300Q96RE9 604 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 HNRNPABQ99729 332 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ASCL2Q99929 193 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF559Q9BR84 538 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 FUCA2Q9BTY2 467 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TDRD1Q9BXT4 1180 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SLC39A8Q9C0K1 460 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 C10orf88Q9H8K7 445 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 FGF22Q9HCT0 170 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 SCRT2Q9NQ03 307 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 GPR173Q9NS66 373 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 PLCXD1Q9NUJ7 323 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TBC1D13Q9NVG8 400 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 UTP6Q9NYH9 597 aaKnown RBP1.96□□□□□ -2.1
ITGB1-213ENST00000484088 IL36AQ9UHA7 158 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 TMCC3Q9ULS5 477 aa1.96□□□□□ -2.1
ITGB1-213ENST00000484088 A0A087WZ39 114 aa1.95□□□□□ -2.1
ITGB1-213ENST00000484088 IGHV3-20A0A0C4DH32 117 aa1.95□□□□□ -2.1
ITGB1-213ENST00000484088 KRTAP16-1A8MUX0 517 aa1.95□□□□□ -2.1
ITGB1-213ENST00000484088 TMCO5BA8MYB1 307 aa1.95□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF732B4DXR9 585 aa1.95□□□□□ -2.1
ITGB1-213ENST00000484088 SLC33A1O00400 549 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms