RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 HAUS5O94927 633 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 IPO7O95373 1038 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ESRRAP11474 423 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 CDH1P12830 882 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 NME2P22392 152 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 EEF1DP29692 281 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 SSTR2P30874 369 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 RFC3P40938 356 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 VPS41P49754 854 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 RPS15AP62244 130 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 BTG2P78543 158 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 TLE4Q04727 773 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ABRAXAS2Q15018 415 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 NDUFA9Q16795 377 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 MEP1AQ16819 746 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 LONRF1Q17RB8 773 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 MFSD4BQ5TF39 518 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 SLC25A25Q6KCM7 469 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 UBE2R2Q712K3 238 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 CDH24Q86UP0 819 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 NFAM1Q8NET5 270 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 PHF10Q8WUB8 498 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 METTL21AQ8WXB1 218 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 KCNJ9Q92806 393 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ZNF669Q96BR6 464 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 UTP23Q9BRU9 249 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 SGPP1Q9BX95 441 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ATG10Q9H0Y0 220 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 CDCP1Q9H5V8 836 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 TRIM45Q9H8W5 580 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 INTS10Q9NVR2 710 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 LRFN1Q9P244 771 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 KLHL42Q9P2K6 505 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 TEKT2Q9UIF3 430 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ZNF223Q9UK11 482 aaPredicted RBP8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 NEU2Q9Y3R4 380 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 CLDN16Q9Y5I7 305 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 AKAP6Q13023 2319 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 ACANP16112 2415 aa8.72□□□□□ -1.01
GTF3C2-210ENST00000480989 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.01
GTF3C2-210ENST00000480989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 IGKV3D-11A0A0A0MRZ8 115 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 MAGEB17A8MXT2 336 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 E5RI56 91 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 TGFBR3LH3BV60 316 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 TXNDC9O14530 226 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 GALR3O60755 368 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC25A12O75746 678 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 TSPAN12O95859 305 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 GABRB3P28472 473 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 HSD17B2P37059 387 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 MAGEA3P43357 314 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 AGTR2P50052 363 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SMSP52788 366 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 AP2B1P63010 937 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 HYAL2Q12891 473 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 DHX34Q14147 1143 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 NSDHLQ15738 373 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 EXT1Q16394 746 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 KRTCAP3Q53RY4 240 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 EMC4Q5J8M3 183 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 RBM20Q5T481 1227 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 THEMIS2Q5TEJ8 643 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 AGTRAPQ6RW13 159 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 MEX3BQ6ZN04 569 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SDCCAG8Q86SQ7 713 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 ASPGQ86U10 573 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 CEP97Q8IW35 865 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 ARMC10Q8N2F6 343 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 MFSD9Q8NBP5 474 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 EEF1AKMT1Q8WVE0 214 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 NRGNQ92686 78 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 PYCR2Q96C36 320 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SDCCAG3Q96C92 435 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SERPINB12Q96P63 405 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 NDNQ99608 321 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 AARSD1Q9BTE6 412 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SARGQ9BW04 601 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 PLAC1Q9HBJ0 212 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 MCCC2Q9HCC0 563 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 CCDC177Q9NQR7 707 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 NECTIN3Q9NQS3 549 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC17A6Q9P2U8 582 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 C19orf25Q9UFG5 118 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC22A7Q9Y694 548 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 NCKAP5O14513 1909 aa8.71□□□□□ -1.02
GTF3C2-210ENST00000480989 A0A1B0GTH9 108 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 FAM237BA0A1B0GVD1 139 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 PINLYPA6NC86 204 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 NKX2-6A6NCS4 301 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 TMEM200CA6NKL6 621 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 E9PLN8 166 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 GOLGA8MH3BSY2 632 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 CHST10O43529 356 aa8.7□□□□□ -1.02
GTF3C2-210ENST00000480989 PRKNO60260 465 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms