RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 NT5CQ8TCD5 201 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
SIK3-209ENST00000480222 C11orf24Q96F05 449 aaPredicted RBP12.03□□□□□ -0.48
SIK3-209ENST00000480222 CNDP2Q96KP4 475 aaKnown RBP12.03□□□□□ -0.48
SIK3-209ENST00000480222 TGM7Q96PF1 710 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 OR2A5Q96R48 311 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 MAP3K3Q99759 626 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 C1orf50Q9BV19 199 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 CCDC106Q9BWC9 280 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 KLHL20Q9Y2M5 609 aa12.03□□□□□ -0.48
SIK3-209ENST00000480222 POLR3HQ9Y535 204 aaPredicted RBP12.03□□□□□ -0.48
SIK3-209ENST00000480222 CACNA1AO00555 2505 aa12.02□□□□□ -0.48
SIK3-209ENST00000480222 ADAMTS20P59510 1910 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 URADA6NGE7 173 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 SLC9B1P1A6NJY1 282 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 CAPN14A8MX76 684 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 LCMT2O60294 686 aaKnown RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 CTSVO60911 334 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 LDOC1O95751 146 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 RPLP0P05388 317 aaKnown RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 CKMT2P17540 419 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 ACP1P24666 158 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 PRDX6P30041 224 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 TIA1P31483 386 aaKnown RBP eCLIP12.02□□□□□ -0.49
SIK3-209ENST00000480222 MLLT3P42568 568 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 GSTM5P46439 218 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 RAP1GDS1P52306 607 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 RPS6KA2Q15349 733 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 AMZ1Q400G9 498 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 RFTN2Q52LD8 501 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 MANEAQ5SRI9 462 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 NKAIN2Q5VXU1 208 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 PRR23CQ6ZRP0 262 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 PAGE2Q7Z2X7 111 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 COMMD6Q7Z4G1 85 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 VN1R4Q7Z5H5 301 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 YTHDF3Q7Z739 585 aaKnown RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 NUDT13Q86X67 352 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 NAXDQ8IW45 347 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 METTL4Q8N3J2 472 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 RNF175Q8N4F7 328 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 Q8N9G6 341 aaPredicted RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 OR4D9Q8NGE8 314 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 CHTF18Q8WVB6 975 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 STARD8Q92502 1023 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 APIPQ96GX9 242 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 MARK4Q96L34 752 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 PPM1MQ96MI6 270 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 QRFPRQ96P65 431 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 MRPL1Q9BYD6 325 aaKnown RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 NLNQ9BYT8 704 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 REXO4Q9GZR2 422 aaKnown RBP12.02□□□□□ -0.49
SIK3-209ENST00000480222 LRRN3Q9H3W5 708 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 SOHLH2Q9NX45 425 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 ZIM2Q9NZV7 527 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 ARMCX1Q9P291 453 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 MCM8Q9UJA3 840 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 ADAM29Q9UKF5 820 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 MAPRE3Q9UPY8 281 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 GPR45Q9Y5Y3 372 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 ZNF292O60281 2723 aa12.02□□□□□ -0.49
SIK3-209ENST00000480222 DCHS1Q96JQ0 3298 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 A0A0J9YVX5 310 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 LRIT2A6NDA9 550 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 PSMD12O00232 456 aaPredicted RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 TXNDC9O14530 226 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 ZSCAN9O15535 394 aaPredicted RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 PCDH7O60245 1069 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 PRMT3O60678 531 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 SRPX2O60687 465 aaPredicted RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 HNRNPCL1O60812 293 aaKnown RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 RASSF9O75901 435 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 KIAA0754O94854 1291 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 TGFB1P01137 390 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 MSL3P1P0C860 447 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 MYF5P13349 255 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 SDC1P18827 310 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 JAK1P23458 1154 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 ASMTP46597 345 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 DIO3P55073 304 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 FOXK2Q01167 660 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 KLF10Q13118 480 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 AASDHQ4L235 1098 aaPredicted RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 NOXRED1Q6NXP6 359 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 FBXO42Q6P3S6 717 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 TRIM40Q6P9F5 258 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 CYP20A1Q6UW02 462 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
SIK3-209ENST00000480222 C1orf52Q8N6N3 182 aaKnown RBP12.01□□□□□ -0.49
SIK3-209ENST00000480222 OR2L5Q8NG80 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms