RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	USP10	Q14694	798 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	RBBP5	Q15291	538 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	NSDHL	Q15738	373 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	EXT1	Q16394	746 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CATSPERE	Q5SY80	951 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	NXPE4	Q6UWF7	544 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	FAM180A	Q6UWF9	173 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SBSN	Q6UWP8	590 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TMEM207	Q6UWW9	146 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CYS1	Q717R9	158 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PRSS41	Q7RTY9	318 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TCAIM	Q8N3R3	496 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	HAS2	Q92819	552 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TSNARE1	Q96NA8	513 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PSMG3-AS1	Q96PY0	264 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	OR4K3	Q96R72	315 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	OR1F2P	Q96R84	312 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CPNE1	Q99829	537 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	MESP1	Q9BRJ9	268 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CNOT10	Q9H9A5	744 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ABI3	Q9P2A4	366 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SLC22A14	Q9Y267	594 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PTPN13	Q12923	2485 aa		11.64	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PSMD12	O00232	456 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TP73	O15350	636 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	RAD51C	O43502	376 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	JRK	O75564	520 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SEC24D	O94855	1032 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	STMN1	P16949	149 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SSTR1	P30872	391 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	HPD	P32754	393 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SCTR	P47872	440 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PLTP	P55058	493 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ATP6V0D1	P61421	351 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF460	Q14592	562 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ABRAXAS2	Q15018	415 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PCOLCE	Q15113	449 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PPP1R3A	Q16821	1122 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	BTBD16	Q32M84	506 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	DEFB134	Q4QY38	66 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PLAG1	Q6DJT9	500 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	RPUSD3	Q6P087	351 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TMPRSS11B	Q86T26	416 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CCDC25	Q86WR0	208 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	GPSM1	Q86YR5	675 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CTAGE3P	Q8IX95	158 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	BCORP1	Q8N888	145 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF740	Q8NDX6	193 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CATSPER1	Q8NEC5	780 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TTL	Q8NG68	377 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	NT5C	Q8TCD5	201 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	GRHL3	Q8TE85	626 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TBC1D20	Q96BZ9	403 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PEX11G	Q96HA9	241 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	FAR2	Q96K12	515 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	IMMP1L	Q96LU5	166 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF354B	Q96LW1	612 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	LPAR4	Q99677	370 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	DERL2	Q9GZP9	239 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PRM3	Q9NNZ6	103 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CSAG2	Q9Y5P2	127 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CCDC88C	Q9P219	2028 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PCSK5	Q92824	1860 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	RELN	P78509	3460 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CNTRL	Q7Z7A1	2325 aa		11.63	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	DOPEY2	Q9Y3R5	2298 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ESPL1	Q14674	2120 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF860	A6NHJ4	632 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	GALR3	O60755	368 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	WDR47	O94967	919 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	S100B	P04271	92 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	FH	P07954	510 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF888	P0CJ79	500 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CCDC166	P0CW27	439 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ITGAM	P11215	1152 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	EDN3	P14138	238 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SPR	P35270	261 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SOX11	P35716	441 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	GP5	P40197	560 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	HNF4A	P41235	474 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TNFSF10	P50591	281 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	OR4D2	P58180	307 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TAS2R50	P59544	299 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	STXBP1	P61764	594 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZNF33B	Q06732	778 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	C2orf54	Q08AI8	447 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	TSN	Q15631	228 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CDKL4	Q5MAI5	379 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	GRTP1	Q5TC63	336 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	SYT10	Q6XYQ8	523 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ANKRD37	Q7Z713	158 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	PDSS2	Q86YH6	399 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	CEP97	Q8IW35	865 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	KRT78	Q8N1N4	520 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	AFAP1L2	Q8N4X5	818 aa		11.62	□□□□□ -0.55
CDK5RAP2-211	ENST00000479584	ST6GALNAC3	Q8NDV1	305 aa		11.62	□□□□□ -0.55

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