RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LETMD1Q6P1Q0 360 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 USP43Q70EL4 1123 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LARP4Q71RC2 724 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LAPTM4BQ86VI4 370 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 DCUN1D3Q8IWE4 304 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 OR4K1Q8NGD4 311 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 NRG4Q8WWG1 115 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ZIC5Q96T25 663 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CNPPD1Q9BV87 410 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 MAP10Q9P2G4 905 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PFDN2Q9UHV9 154 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 MYO7AQ13402 2215 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 SDK1Q7Z5N4 2213 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 A0A096LPI6 279 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TRIM64CA6NLI5 447 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 GJB3O75712 270 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 OR5F1O95221 314 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 RPS17P08708 135 aaKnown RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 ATF4P18848 351 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 BCAP31P51572 246 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF763Q0D2J5 394 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TLDC1Q6P9B6 456 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 GALNT7Q86SF2 657 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 SLC30A8Q8IWU4 369 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 HSH2DQ96JZ2 352 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 UBXN10Q96LJ8 280 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 ATOH8Q96SQ7 321 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 SLC2A11Q9BYW1 496 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 DLGAP4Q9Y2H0 992 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 FAM172BPA6NC97 362 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 NOTOA8MTQ0 251 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TTC34A8MYJ7 566 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 BOLA2-SMG1P6H3BVE0 249 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TPST2O60704 377 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 SNAP29O95721 258 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 HOXD9P28356 352 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 CRISP3P54108 245 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 BIKQ13323 160 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 ISOC1Q96CN7 298 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 GSDMCQ9BYG8 508 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 PRDX3P30048 256 aaKnown RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 GUCA1AP43080 201 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 MGAT3Q09327 533 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 LCN8Q6JVE9 175 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 TAF8Q7Z7C8 310 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 GJD3Q8N144 294 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 FNDC8Q8TC99 324 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 POLR2J3Q9H1A7 115 aaKnown RBP13.86□□□□□ -0.19
COL20A1-206ENST00000479501 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 SNTG1Q9NSN8 517 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 CLEC4AQ9UMR7 237 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 BAIAP2Q9UQB8 552 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 NUP205Q92621 2012 aa13.86□□□□□ -0.19
COL20A1-206ENST00000479501 ERI3O43414 337 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 RPS3P23396 243 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 NCBP2P52298 156 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TIGD6Q17RP2 521 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 OTUD1Q5VV17 481 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SAMD14Q8IZD0 417 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM145Q8NBT3 493 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 GEMIN6Q8WXD5 167 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 DPEP2Q9H4A9 486 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 FBXL12Q9NXK8 326 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CFL2Q9Y281 166 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 HEBP2Q9Y5Z4 205 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 IRAK3Q9Y616 596 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MROH6A6NGR9 719 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 DENRO43583 198 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 JUPP14923 745 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 NRIP1P48552 1158 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MEF2AQ02078 507 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 DOC2AQ14183 400 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 RBM12BQ8IXT5 1001 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 ADGRG2Q8IZP9 1017 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CBARPQ8N350 705 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MOSPD2Q8NHP6 518 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF420Q8TAQ5 688 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SPACA7Q96KW9 195 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TRBC2A0A5B9 178 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 IRGMA1A4Y4 181 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 NPIPB15A6NHN6 443 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MUSKO15146 869 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 OR6A2O95222 327 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 HNRNPA1P09651 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CSNK2A2P19784 350 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CPN2P22792 545 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CLDN8P56748 225 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 RNASE12Q5GAN4 147 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 PGBD5Q8N414 524 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms