RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SLC35G6P0C7Q6 338 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 TAC1P20366 129 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 PTPN4P29074 926 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
SCAF11-206ENST00000474828 SERPINB1P30740 379 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 DLSTP36957 453 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 HNF4AP41235 474 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 DNAJB13P59910 316 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 NAA20P61599 178 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 VAC14Q08AM6 782 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 TRAF3Q13114 568 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 DSG2Q14126 1118 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 GGTA1PQ4G0N0 100 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 MED25Q71SY5 747 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 C4orf33Q8N1A6 199 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 AMER3Q8N944 861 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 KCT2Q8NC54 265 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 UBE2E3Q969T4 207 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 CCDC126Q96EE4 140 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 MOCOSQ96EN8 888 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 AICDAQ9GZX7 198 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 DRC3Q9H069 523 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 IPPKQ9H8X2 491 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 CLK4Q9HAZ1 481 aaKnown RBP16.1■□□□□ 0.17
SCAF11-206ENST00000474828 PPT2Q9UMR5 302 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 CDC14AQ9UNH5 594 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 FARSAQ9Y285 508 aaKnown RBP16.1■□□□□ 0.17
SCAF11-206ENST00000474828 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-206ENST00000474828 NDUFA9Q16795 377 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 KRT71Q3SY84 523 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 UNC50Q53HI1 259 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 C10orf62Q5T681 223 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-206ENST00000474828 C1orf189Q5VU69 101 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 NIPAL1Q6NVV3 410 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 CCDC81Q6ZN84 652 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 SYVN1Q86TM6 617 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.09■□□□□ 0.171e-8■■■■■ 174
SCAF11-206ENST00000474828 OR7G3Q8NG95 312 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 ADAMTS17Q8TE56 1095 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 NACC2Q96BF6 587 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 TMEM237Q96Q45 408 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 SLC7A5P2Q9GIP4 190 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 TGIF2Q9GZN2 237 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 ZNF304Q9HCX3 659 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 ADGRE2Q9UHX3 823 aa16.09■□□□□ 0.17
SCAF11-206ENST00000474828 ZFYVE26Q68DK2 2539 aa16.08■□□□□ 0.17
SCAF11-206ENST00000474828 LRIT2A6NDA9 550 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 NDUFS4O43181 175 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 CREG1O75629 220 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 ALAS2P22557 587 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 PIK3CBP42338 1070 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 RPS15P62841 145 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 RGS1Q08116 209 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 HERC3Q15034 1050 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 EXOC3L1Q86VI1 746 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 PDSS2Q86YH6 399 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 SRRM1Q8IYB3 904 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 DTWD1Q8N5C7 304 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 OR52B6Q8NGF0 335 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 UTP15Q8TED0 518 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 ZNF473Q8WTR7 871 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 RNF31Q96EP0 1072 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 MAGEB10Q96LZ2 347 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 SPSB2Q99619 263 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 MACROD1Q9BQ69 325 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 ACTL8Q9H568 366 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 NOL11Q9H8H0 719 aaKnown RBP16.08■□□□□ 0.16
SCAF11-206ENST00000474828 CPNE5Q9HCH3 593 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 OXSMQ9NWU1 459 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 IRAK4Q9NWZ3 460 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 ZNF225Q9UK10 706 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
SCAF11-206ENST00000474828 ZNF891A8MT65 544 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 C9J4A7 227 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 RGS16O15492 202 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 PRPF4O43172 522 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 GALR3O60755 368 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 CLDN9O95484 217 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 CREB1P16220 341 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 ETV4P43268 484 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 ARFIP1P53367 373 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 MC1RQ01726 317 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 COL9A2Q14055 689 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 CASP8Q14790 479 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 RBBP5Q15291 538 aaKnown RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 NKG7Q16617 165 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 HIST2H2ACQ16777 129 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 UGT8Q16880 541 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 HIST2H2AA3Q6FI13 130 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 MED27Q6P2C8 311 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 ENDOVQ8N8Q3 282 aaKnown RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 OR2Y1Q8NGV0 311 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 OR6Y1Q8NGX8 325 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 WDR20Q8TBZ3 569 aa16.07■□□□□ 0.16
SCAF11-206ENST00000474828 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-206ENST00000474828 STARD8Q92502 1023 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms