RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SEPT9Q9UHD8 586 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 OPN4Q9UHM6 478 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 AJAP1Q9UKB5 411 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 NFU1Q9UMS0 254 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 EXOGQ9Y2C4 368 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 A0A087WZ62 844 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 A0A0U1RQS6 177 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PDZK1P1A8MUH7 402 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SERPINE3A8MV23 424 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 FAM171A2A8MVW0 826 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 EVPLLA8MZ36 301 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CTDSP2O14595 271 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HS3ST1O14792 307 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 KDELR3O43731 214 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TULP3O75386 442 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HOXC4P09017 264 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 CTSAP10619 480 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 DRD2P14416 443 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 AGXTP21549 392 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A4P22310 534 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MMP8P22894 467 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CEACAM6P40199 344 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RAP1GAPP47736 663 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CEBPGP53567 150 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 NRG3P56975 720 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ERVK-25P63136 954 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SRSF2Q01130 221 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ORC2Q13416 577 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 GPNMBQ14956 572 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SF1Q15637 639 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 RFX4Q33E94 735 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ARMCX4Q5H9R4 360 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF667Q5HYK9 610 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 KIAA1755Q5JYT7 1200 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RABGAP1LQ5R372 815 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ANKRD26P1Q6NSI1 321 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ASCL4Q6XD76 172 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SH2D5Q6ZV89 423 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MED25Q71SY5 747 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 LYSMD3Q7Z3D4 306 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RAB43Q86YS6 212 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PLD3Q8IV08 490 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ERI1Q8IV48 349 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZC3H3Q8IXZ2 948 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GHDCQ8N2G8 530 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 OR5M8Q8NGP6 311 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SDR42E1Q8WUS8 393 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 COPS5Q92905 334 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HAVCR1Q96D42 359 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PAGE5Q96GU1 130 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 WDFY2Q96P53 400 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TSSK3Q96PN8 268 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MCCC1Q96RQ3 725 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ORAI2Q96SN7 254 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 NPAS1Q99742 590 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF559Q9BR84 538 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 FDXACB1Q9BRP7 624 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF2Q9BSG1 426 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ERVK-6Q9BXR3 956 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ASCC2Q9H1I8 757 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 TAS2R9Q9NYW1 312 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GCNT4Q9P109 453 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MAP10Q9P2G4 905 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 WASF3Q9UPY6 502 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CNTN6Q9UQ52 1028 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 B3GNT3Q9Y2A9 372 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ARHGEF10O15013 1369 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 NESP48681 1621 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SHROOM2Q13796 1616 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MROH6A6NGR9 719 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ARHGAP42A6NI28 874 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 M0QZ92 97 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 WWP2O00308 870 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF185O15231 689 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MID1O15344 667 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 DLEU1O43261 78 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MSI1O43347 362 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 VPS26AO75436 327 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 KDM4BO94953 1096 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ESRRBO95718 433 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CYB5R3P00387 301 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 SLC10A3P09131 477 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TMEM191BP0C7N4 346 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 JUNBP17275 347 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 ITGB5P18084 799 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 FPR3P25089 353 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 S100A7P31151 101 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HNRNPH3P31942 346 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 FDFT1P37268 417 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PBX3P40426 434 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GNPDA1P46926 289 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 COMPP49747 757 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 CDK9P50750 372 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 CCR6P51684 374 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 B4GALNT1Q00973 533 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PDZK1IP1Q13113 114 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 EIF4EBP2Q13542 120 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms