RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ARGFXA6NJG6 315 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NRP1O14786 923 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ITGA10O75578 1167 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DIRAS1O95057 198 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GNAO1P09471 354 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 VIPR1P32241 457 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BDKRB1P46663 353 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AIF1P55008 147 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TEAD2Q15562 447 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ABHD15Q6UXT9 468 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RBM15BQ8NDT2 890 aaKnown RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KREMEN1Q96MU8 473 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF355PQ9NSJ1 428 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AHCTF1Q8WYP5 2266 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CHEK1O14757 476 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OPA3Q9H6K4 179 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AASSQ9UDR5 926 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A0A1B0GV50 99 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCNX2A6NKB5 2137 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCNE2O96020 404 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SFTPBP07988 381 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCNCP24863 283 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BMP8BP34820 402 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KLHL22Q53GT1 634 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BMP8AQ7Z5Y6 402 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DENND2DQ9H6A0 471 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DERAQ9Y315 318 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ORC5O43913 435 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 B4GALT4O60513 344 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HOXB9P17482 250 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MMP8P22894 467 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 F2RP25116 425 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TAF1AQ15573 450 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CHRNA6Q15825 494 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HMGN2P46Q86SG4 172 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KCNH6Q9H252 994 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PTGER3P43115 390 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRRT3Q5FWE3 981 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRRC66Q68CR7 880 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CD300LFQ8TDQ1 290 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHB18PQ96TA0 734 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DNAJC27Q9NZQ0 273 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC17A6Q9P2U8 582 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 COL1A2P08123 1366 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TNFSF12O43508 249 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MPZL2O60487 215 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRCH4O75427 683 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TYRP14679 529 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 VSX2P58304 361 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IL17AQ16552 155 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LIX1LQ8IVB5 337 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DUXAA6NLW8 204 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLDN25C9JDP6 229 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 K7EPI3 171 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLDN7O95471 211 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCL5P13501 91 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 JUPP14923 745 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRKD1Q15139 912 aaPredicted RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ISPDA4D126 451 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AGPSO00116 658 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SCO2O43819 266 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MRPL3P09001 348 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SPATA31C1P0DKV0 1188 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BCKDHAP12694 445 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RORCP51449 518 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CTBP2P56545 445 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCDC28BQ9BUN5 200 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NANSQ9NR45 359 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TUBG2Q9NRH3 451 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C19orf25Q9UFG5 118 aaPredicted RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A6NHS1 94 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HCRTR2O43614 444 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC34A2O95436 690 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IRF9Q00978 393 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms