RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 OR4D2P58180 307 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 OLR1P78380 273 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 RHAGQ02094 409 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 PWP1Q13610 501 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CSHL1Q14406 222 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 ABRAXAS2Q15018 415 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 HERC3Q15034 1050 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 MEP1AQ16819 746 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 DEFB134Q4QY38 66 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 PAPD4Q6PIY7 484 aaKnown RBP12.5□□□□□ -0.41
CPSF4-210ENST00000469897 KIAA0408Q6ZU52 694 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 AFAP1L2Q8N4X5 818 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 OR56A3Q8NH54 315 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 TSLPQ969D9 159 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 NPAS2Q99743 824 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 OLFM1Q99784 485 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 UTP23Q9BRU9 249 aaKnown RBP12.5□□□□□ -0.41
CPSF4-210ENST00000469897 HES7Q9BYE0 225 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 MMP25Q9NPA2 562 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 LANCL2Q9NS86 450 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 ENTPD4Q9Y227 616 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 SPTAN1Q13813 2472 aaKnown RBP12.5□□□□□ -0.41
CPSF4-210ENST00000469897 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CTAGE15A4D2H0 777 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 PABPN1LA6NDY0 278 aaKnown RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 MAGEB17A8MXT2 336 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 FAM227AF5H4B4 570 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 CES2O00748 559 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 TTI1O43156 1089 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 HNRNPRO43390 633 aaKnown RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 GALR3O60755 368 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 ALOX12P18054 663 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 SAT1P21673 171 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 IL10P22301 178 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 BTG2P78543 158 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 OC90Q02509 493 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 OR1C1Q15619 314 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 EXT1Q16394 746 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 MRGPRGQ86SM5 289 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 CTAGE6Q86UF2 777 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 ATL1Q8WXF7 558 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 NEIL2Q969S2 332 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 TBC1D20Q96BZ9 403 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 FBXL8Q96CD0 374 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 LPAR4Q99677 370 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 SARGQ9BW04 601 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 UNKQ9C0B0 810 aaKnown RBP12.49□□□□□ -0.41
CPSF4-210ENST00000469897 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 CHMP2BQ9UQN3 213 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 NOTCH2Q04721 2471 aa12.49□□□□□ -0.41
CPSF4-210ENST00000469897 TRBC2A0A5B9 178 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 ENO4A6NNW6 628 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 NDC80O14777 642 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 FHP07954 510 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF888P0CJ79 500 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 CA7P43166 264 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 SCTRP47872 440 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 AP1S2P56377 157 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 RAB8AP61006 207 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 RBPJQ06330 500 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 USP10Q14694 798 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 RBBP5Q15291 538 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 FAM45BPQ6NSW5 357 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 GALNT7Q86SF2 657 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 ANKMY2Q8IV38 441 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 CYP4X1Q8N118 509 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 PDIK1LQ8N165 341 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 TBC1D19Q8N5T2 526 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 MDS2Q8NDY4 140 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 NT5CQ8TCD5 201 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 FAM45AQ8TCE6 357 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 UTP15Q8TED0 518 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 SLC5A11Q8WWX8 675 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 CCDC120Q96HB5 630 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 PDLIM5Q96HC4 596 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 PTCHD1Q96NR3 888 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 OR1F2PQ96R84 312 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 WDR83Q9BRX9 315 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 SUCOQ9UBS9 1254 aaKnown RBP12.48□□□□□ -0.41
CPSF4-210ENST00000469897 ZFP69BQ9UJL9 534 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 SLC22A14Q9Y267 594 aa12.48□□□□□ -0.41
CPSF4-210ENST00000469897 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 GABRR3A8MPY1 467 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 A8MUA0 341 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 NPIPA5E9PKD4 350 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 CDC7O00311 574 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ZSCAN12O43309 604 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 PRMT3O60678 531 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SLC19A2O60779 497 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms