RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 KATNAL1Q9BW62 490 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GON7Q9BXV9 100 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.67□□□□□ -1.18
TPM3-215ENST00000469717 LRTM1Q9HBL6 345 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 RP1L1Q8IWN7 2480 aaPredicted RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 LOC730098B7Z3J9 87 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 RFXANKO14593 260 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TSPAN4O14817 238 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TAPBPO15533 448 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TSPAN9O75954 239 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 CPSF4O95639 269 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 ESR1P03372 595 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GSTM1P09488 218 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 OR4Q2P0C623 313 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 SMPD1P17405 629 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ENGP17813 658 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 S100A3P33764 101 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TIE1P35590 1138 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GGT2P36268 569 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 MAN2A2P49641 1150 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 PSPHP78330 225 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 POU4F3Q15319 338 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ZRANB3Q5FWF4 1079 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ATG9BQ674R7 924 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 IDO2Q6ZQW0 420 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ZNF621Q6ZSS3 439 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 PTOV1Q86YD1 416 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 CLDN19Q8N6F1 224 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 FLCNQ8NFG4 579 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ASIC4Q96FT7 647 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 OPALINQ96PE5 141 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 C1QTNF7Q9BXJ2 289 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 C1QTNF3Q9BXJ4 246 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 FAM83DQ9H4H8 585 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 SCML1Q9UN30 329 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 SAMD4AQ9UPU9 718 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 A0A0B4J203 849 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 LOC102723532A0A0G2JNH3 316 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 PLK4O00444 970 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 YY2O15391 372 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GPR32O75388 356 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 APOL3O95236 402 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 KCNK5O95279 499 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ASGR1P07306 291 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 PKMP14618 531 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 GNPDA1P46926 289 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 PSEN2P49810 448 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ACVR1Q04771 509 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 CCDC85BQ15834 202 aaPredicted RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 INO80DQ53TQ3 878 aaPredicted RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 PYDC2Q56P42 97 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 AFMIDQ63HM1 303 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 FIP1L1Q6UN15 594 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 SBSNQ6UWP8 590 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ZNF598Q86UK7 904 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 TOP6BLQ8N6T0 577 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 ATP6V1C2Q8NEY4 427 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TOR1AIP2Q8NFQ8 470 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 SPPL2AQ8TCT8 520 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 UPRTQ96BW1 309 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 DIRAS2Q96HU8 199 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 UROC1Q96N76 676 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 EGFL8Q99944 293 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 RTP3Q9BQQ7 232 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TTLL2Q9BWV7 592 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 SLC22A4Q9H015 551 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 LINC00597Q9H2U6 94 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 GLTPQ9NZD2 209 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 RHCGQ9UBD6 479 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 NDRG2Q9UN36 371 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 DUSP12Q9UNI6 340 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 RWDD3Q9Y3V2 267 aa7.67□□□□□ -1.18
TPM3-215ENST00000469717 TNPO3Q9Y5L0 923 aaKnown RBP7.67□□□□□ -1.18
TPM3-215ENST00000469717 TNS1Q9HBL0 1735 aaKnown RBP7.66□□□□□ -1.18
TPM3-215ENST00000469717 A0A0D9SEW6 157 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 A0A1W2PQL4 384 aaPredicted RBP7.66□□□□□ -1.18
TPM3-215ENST00000469717 KCNJ13O60928 360 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 CDRT1O95170 752 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 CCNDBP1O95273 360 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 IGLV3-25P01717 112 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 IL6P05231 212 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 ALAS2P22557 587 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 BRCC3P46736 316 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 SLC9A3P48764 834 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 SCN1BQ07699 218 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 MGAT3Q09327 533 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 HNRNPA0Q13151 305 aaKnown RBP7.66□□□□□ -1.18
TPM3-215ENST00000469717 P2RY14Q15391 338 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 TOR1AIP1Q5JTV8 583 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 UBXN11Q5T124 520 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 LIPKQ5VXJ0 399 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 SCD5Q86SK9 330 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 ADAMTSL2Q86TH1 951 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 SLC51BQ86UW2 128 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 ZZZ3Q8IYH5 903 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 RDH10Q8IZV5 341 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 OR8H3Q8N146 312 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 CFAP52Q8N1V2 620 aa7.66□□□□□ -1.18
TPM3-215ENST00000469717 ENKURQ8TC29 256 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms