RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 GPR89AB7ZAQ6 455 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 LIASO43766 372 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 GCATO75600 419 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 JTBO76095 146 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PRKCGP05129 697 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 APRTP07741 180 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 HOXC4P09017 264 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 GPR89BP0CG08 455 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 TMIGD3P0DMS9 266 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PSMB4P28070 264 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 TEAD1P28347 426 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 EPHA8P29322 1005 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SPAM1P38567 509 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 RXRGP48443 463 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PTH2RP49190 550 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 KIAA1024LP59773 190 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SRP54P61011 504 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 AP2B1P63010 937 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PRAMEP78395 509 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 TXNL4AP83876 142 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 IL9RQ01113 521 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CFHR3Q02985 330 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CKAP4Q07065 602 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CDH17Q12864 832 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SLC1A5Q15758 541 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CNGA3Q16281 694 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 BTBD16Q32M84 506 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 ATPAF1Q5TC12 328 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 DOK6Q6PKX4 331 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 LVRNQ6Q4G3 990 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 TAF8Q7Z7C8 310 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PCGF5Q86SE9 256 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 AMIGO2Q86SJ2 522 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 HEATR4Q86WZ0 1026 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PGBD5Q8N414 524 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 OTUD6BQ8N6M0 293 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PPHLN1Q8NEY8 458 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 GSDMBQ8TAX9 411 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CCDC110Q8TBZ0 833 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PIH1D2Q8WWB5 315 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 NAT6Q93015 286 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 MAGOHBQ96A72 148 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CENPTQ96BT3 561 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 ULK4Q96C45 1275 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CNDP2Q96KP4 475 aaKnown RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 TBATAQ96M53 351 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 MCCC1Q96RQ3 725 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SUDS3Q9H7L9 328 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 RMI1Q9H9A7 625 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 BFARQ9NZS9 450 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 ZNHIT2Q9UHR6 403 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CRLS1Q9UJA2 301 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 DAPP1Q9UN19 280 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 PPIL1Q9Y3C6 166 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF711Q9Y462 761 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 OR1A2Q9Y585 309 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SAR1BQ9Y6B6 198 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CSNK1G3Q9Y6M4 447 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 FAM186AA6NE01 2351 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 SDK1Q7Z5N4 2213 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CCDC187A0A096LP49 1063 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 LOC105369274A0A096LPK9 316 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 LOC102723532A0A0G2JNH3 316 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 GLYATL1P3A0A0U1RQE8 302 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 A0A1W2PR77 199 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 HEATR9A2RTY3 570 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 TARM1B6A8C7 271 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 H7C1Q1 480 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SCAMP1O15126 338 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 VEGFDO43915 354 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SH3BP5O60239 455 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SDC3O75056 442 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 KCNK5O95279 499 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CLDN7O95471 211 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 MT-CYBP00156 380 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CSF2P04141 144 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF37AP17032 561 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-208ENST00000469585 MSH3P20585 1137 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 DGKAP23743 735 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 HMGCLP35914 325 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 GNPDA1P46926 289 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SPINT3P49223 89 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 STC1P52823 247 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 DCDC1P59894 354 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 PFN3P60673 137 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CDK3Q00526 305 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CDK16Q00536 496 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ILKQ13418 452 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 KRT33BQ14525 404 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 TAF1AQ15573 450 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-208ENST00000469585 WSCD2Q2TBF2 565 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SIRPB2Q5JXA9 342 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 LDLRAP1Q5SW96 308 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 LYPLAL1Q5VWZ2 237 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ALS2CLQ60I27 953 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ACSM6Q6P461 480 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CASC4Q6P4E1 433 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 GCNT7Q6ZNI0 430 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 B4GALNT4Q76KP1 1039 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms