RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ANKDD1BA6NHY2 528 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 B4E171 279 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TMEM150CB9EJG8 249 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SLCO1B7G3V0H7 640 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SDHDO14521 159 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 NDUFS4O43181 175 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SKAP2O75563 359 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 CRCPO75575 148 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 MED26O95402 600 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TGDSO95455 350 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 VIMP08670 466 aaKnown RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 SMIM10L1P0DMW3 83 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 KITP10721 976 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CCL4P13236 92 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 DRD4P21917 467 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 PRPH2P23942 346 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CSTF2P33240 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
VCP-204ENST00000466100 TSPAN7P41732 249 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 ARL4DP49703 201 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SEC24CP53992 1094 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 HMGCS1Q01581 520 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 MC2RQ01718 297 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 ACY1Q03154 408 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TUBB3Q13509 450 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CUL3Q13618 768 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 PDCD2Q16342 344 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 SGO1Q5FBB7 561 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TCTE1Q5JU00 501 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 WASHC2DQ5SRD0 308 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TMEM214Q6NUQ4 689 aaKnown RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 SCIMPQ6UWF3 145 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 Q6ZSR9 355 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 DGLUCYQ7Z3D6 616 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 UBE3DQ7Z6J8 389 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 HOMEZQ8IX15 550 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CSNK1A1LQ8N752 337 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 GBP7Q8N8V2 638 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SLC13A3Q8WWT9 602 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 STON2Q8WXE9 905 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 RERGQ96A58 199 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 MTFMTQ96DP5 389 aaKnown RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 C19orf60Q96EN9 201 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 C11orf24Q96F05 449 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 CMTM7Q96FZ5 175 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SMIM10Q96HG1 83 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 MAELQ96JY0 434 aaKnown RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 C10orf90Q96M02 699 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 ZNF717Q9BY31 904 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 STRADBQ9C0K7 418 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 SPRTNQ9H040 489 aaPredicted RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 KLHL31Q9H511 634 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 MEAF6Q9HAF1 191 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 APMAPQ9HDC9 416 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 LHX9Q9NQ69 397 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 VTI1BQ9UEU0 232 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 RUVBL1Q9Y265 456 aaKnown RBP10.62□□□□□ -0.71
VCP-204ENST00000466100 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 USH1CQ9Y6N9 552 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CFAP47Q6ZTR5 3102 aa10.62□□□□□ -0.71
VCP-204ENST00000466100 CELSR3Q9NYQ7 3312 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 CCDC187A0A096LP49 1063 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 EFCAB7A8K855 629 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 MAP3K7O43318 606 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 SEMA3DO95025 777 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 TIAF1O95411 115 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 CHEK2O96017 543 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 SLC35G6P0C7Q6 338 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 LINC00032P0C843 101 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 PRR35P0CG20 571 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 FGF5P12034 268 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 ETV5P41161 510 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 EMP3P54852 163 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 ITGA1P56199 1179 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 PHEXP78562 749 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 TBL3Q12788 808 aaKnown RBP10.61□□□□□ -0.71
VCP-204ENST00000466100 TARDBPQ13148 414 aaKnown RBP eCLIP10.61□□□□□ -0.71
VCP-204ENST00000466100 EIF3IQ13347 325 aaKnown RBP10.61□□□□□ -0.71
VCP-204ENST00000466100 TUBB8Q3ZCM7 444 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 DEPDC1Q5TB30 811 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 VWA5B1Q5TIE3 1220 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 KHDRBS2Q5VWX1 349 aaKnown RBP10.61□□□□□ -0.71
VCP-204ENST00000466100 TMPRSS7Q7RTY8 843 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 AFAP1L2Q8N4X5 818 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 KCT2Q8NC54 265 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 OR8K5Q8NH50 307 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 RFWD2Q8NHY2 731 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 PMEPA1Q969W9 287 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 MS4A6EQ96DS6 147 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 FCRL1Q96LA6 429 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 OR6C1Q96RD1 312 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 F2RL3Q96RI0 385 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 CMKLR1Q99788 373 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 CCT7Q99832 543 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 NUF2Q9BZD4 464 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 OR51B5Q9H339 312 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 KCNK13Q9HB14 408 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms