RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 BRAT1Q6PJG6 821 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 MAL2Q969L2 176 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TMEM169Q96HH4 297 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SCLYQ96I15 445 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SP140LQ9H930 580 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 THSD1Q9NS62 852 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TMEM184CQ9NVA4 438 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC25A13Q9UJS0 675 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 ITGB1BP2Q9UKP3 347 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PCDHGA2Q9Y5H1 932 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 BNIP3LO60238 219 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PCDH7O60245 1069 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PARNO95453 639 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 VIPP01282 170 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 INHAP05111 366 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 URODP06132 367 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CTSAP10619 480 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 GABRB1P18505 474 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 MAPK9P45984 424 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CLK1P49759 484 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 LIMK1P53667 647 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PNLIPRP1P54315 467 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 RBBP4Q09028 425 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 NAE1Q13564 534 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SF1Q15637 639 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 USP43Q70EL4 1123 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CCDC80Q76M96 950 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CMTM8Q8IZV2 173 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TRAM1L1Q8N609 369 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 DENND6BQ8NEG7 585 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 RAET1EQ8TD07 263 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 GGHQ92820 318 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZNF558Q96NG5 402 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CPNE5Q9HCH3 593 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 GPATCH2Q9NW75 528 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 MGAT4DA6NG13 374 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 UPK1BO75841 260 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CYP2A6P11509 494 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 C21orf33P30042 268 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 VIPR1P32241 457 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TGFBR1P36897 503 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC19A1P41440 591 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 EIF2B2P49770 351 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CD300CQ08708 224 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 DNASE1L3Q13609 305 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TIGD6Q17RP2 521 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 HSD11B1LQ7Z5J1 315 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 NLRP8Q86W28 1048 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TMC8Q8IU68 726 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CHST14Q8NCH0 376 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR10G2Q8NGC3 310 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR4A15Q8NGL6 344 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 HUS1BQ8NHY5 278 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SCAMP4Q969E2 229 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 EXO1Q9UQ84 846 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TRAV19A0A0A6YYK7 116 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 LEFTY2O00292 366 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 NPC1O15118 1278 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SRPRAP08240 638 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SYT16Q17RD7 645 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 MICAQ29983 383 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZNF181Q2M3W8 571 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 IFI44LQ53G44 452 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 LRRC73Q5JTD7 316 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 C10orf62Q5T681 223 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC22A16Q86VW1 577 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 DEPDC4Q8N2C3 294 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 SPPL2AQ8TCT8 520 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TMEM38AQ9H6F2 299 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZBTB20Q9HC78 741 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 CCDC59Q9P031 241 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 ANKMY1Q9P2S6 941 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 TESMINQ9Y4I5 508 aa12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 HELZP42694 1942 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-204ENST00000465659 ALPK3Q96L96 1907 aa12.27□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.44
ARHGEF3-204ENST00000465659 TMEM202A6NGA9 273 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms