RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 BTNL2Q9UIR0 455 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 MAPRE3Q9UPY8 281 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZNF451Q9Y4E5 1061 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PRSS21Q9Y6M0 314 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZFP37Q9Y6Q3 630 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 ZNF106Q9H2Y7 1883 aaKnown RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 A0A1W2PQ09 198 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 C1orf226A1L170 272 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 NT5C1B-RDH14C9J2C7 533 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ZNF670-ZNF695F2Z2N8 137 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 F8W810 466 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 CCNB2O95067 398 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 IGHA2P01877 340 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 CTSHP09668 335 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 COX7A2P14406 83 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ITGB7P26010 798 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ACRV1P26436 265 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 HLA-DMAP28067 261 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ERP29P30040 261 aaKnown RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 SLC6A12P48065 614 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 SLC11A2P49281 568 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 P2RX3P56373 397 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 SELENOWP63302 87 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 CYP4F2P78329 520 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 SLAMF1Q13291 335 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 NFATC2Q13469 925 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ARHGEF7Q14155 803 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 MED22Q15528 200 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 IFI44LQ53G44 452 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 MEDAGQ5VYS4 303 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 TIGD3Q6B0B8 471 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 FAM151BQ6UXP7 276 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 CAMKMTQ7Z624 323 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 VWA5B2Q8N398 1253 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ZFAND1Q8TCF1 268 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 GPR151Q8TDV0 419 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ELMO1Q92556 727 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 KIAA1143Q96AT1 154 aaPredicted RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 EID2BQ96D98 161 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 METTL2AQ96IZ6 378 aaKnown RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 SPATA17Q96L03 361 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 HTATIP2Q9BUP3 242 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 TTLL2Q9BWV7 592 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 BARHL1Q9BZE3 327 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 FZD3Q9NPG1 666 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 RPRD1BQ9NQG5 326 aaKnown RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 PLSCR3Q9NRY6 295 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 TMEM184CQ9NVA4 438 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 CLN6Q9NWW5 311 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 LHX3Q9UBR4 397 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 MUTYHQ9UIF7 546 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 KLHL21Q9UJP4 597 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 FZD4Q9ULV1 537 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 LSM2Q9Y333 95 aaKnown RBP7.03□□□□□ -1.28
USP48-206ENST00000464577 CMAHPQ9Y471 501 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 SNX8Q9Y5X2 465 aa7.03□□□□□ -1.28
USP48-206ENST00000464577 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 CCDC182A6NF36 153 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZAR1LA6NP61 321 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 A8MV72 311 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 ERVH48-1M5A8F1 160 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CBX4O00257 560 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 GCM2O75603 506 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 CPSF4O95639 269 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 CRYZL1O95825 349 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 LGI1O95970 557 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RPS19P39019 145 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 LIMS1P48059 325 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 KCNQ1P51787 676 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SPIBQ01892 262 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 LRRC74AQ0VAA2 488 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZNF177Q13360 481 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 DMC1Q14565 340 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 PTPRRQ15256 657 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RGNQ15493 299 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 BAK1Q16611 211 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FAM110CQ1W6H9 321 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 EXOC3L2Q2M3D2 409 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 GLYR1Q49A26 553 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 GPR33Q49SQ1 333 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RNLSQ5VYX0 342 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FRG2Q64ET8 278 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 MBOAT1Q6ZNC8 495 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 PLCZ1Q86YW0 608 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CLECL1Q8IZS7 167 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 GDPD1Q8N9F7 314 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 WDR36Q8NI36 951 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 SPPL2AQ8TCT8 520 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 HCAR2Q8TDS4 363 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 UTP15Q8TED0 518 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 MYO19Q96H55 970 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FRG2BQ96QU4 278 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 NIPSNAP1Q9BPW8 284 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CNPPD1Q9BV87 410 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP48-206ENST00000464577 ASB8Q9H765 288 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CCSER2Q9H7U1 834 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 NIPAL2Q9H841 368 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZNF556Q9HAH1 456 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms