RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SEC16BQ96JE7 1060 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC26A1Q9H2B4 701 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 IPPKQ9H8X2 491 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC22A7Q9Y694 548 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SCN3AQ9NY46 2000 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CCDC151A5D8V7 595 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 URADA6NGE7 173 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ANKDD1BA6NHY2 528 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 DLX3O60479 287 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CNOT3O75175 753 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 FBLP22087 321 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CDC20Q12834 499 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 DSG2Q14126 1118 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 HERC3Q15034 1050 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 NKG7Q16617 165 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 UGT8Q16880 541 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 FAM69BQ5VUD6 431 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 LIPJQ5W064 366 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 OR9A4Q8NGU2 314 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 OR2Y1Q8NGV0 311 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ZCCHC10Q8TBK6 192 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ATP6V1E2Q96A05 226 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CATSPER2Q96P56 530 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 YIPF2Q9BWQ6 316 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC6A16Q9GZN6 736 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 RHBGQ9H310 441 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 NOL11Q9H8H0 719 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 WDR54Q9H977 334 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ANKHQ9HCJ1 492 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 ZNF282Q9UDV7 671 aaPredicted RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 PCTPQ9UKL6 214 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 EMCNQ9ULC0 261 aa13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 PTRH2Q9Y3E5 179 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-205ENST00000464493 CDC14CA4D256 554 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 VSTM2BA6NLU5 285 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 H0YIG0 161 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 OR7A17O14581 309 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 UGDHO60701 494 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 CLEC3AO75596 197 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 FURINP09958 794 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 ALOX12P18054 663 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 IL1RNP18510 177 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 HNF4AP41235 474 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 FOLR3P41439 243 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 PRKAA2P54646 552 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 STXBP1P61764 594 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 HERVK_113P63132 956 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 RHDQ02161 417 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 OCA2Q04671 838 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 HYAL2Q12891 473 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 IL10RAQ13651 578 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 SSPNQ14714 243 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 GRHL2Q6ISB3 625 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 MED27Q6P2C8 311 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 PRSS41Q7RTY9 318 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 SLC22A9Q8IVM8 553 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 SRRM1Q8IYB3 904 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 LAS2Q8IYD9 372 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 AMER3Q8N944 861 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 UTP15Q8TED0 518 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 CCT6BQ92526 530 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 NSUN5Q96P11 429 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 C1QTNF3Q9BXJ4 246 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 ERVK-6Q9BXR3 956 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 KLHL31Q9H511 634 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 CTSFQ9UBX1 484 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 NAALAD2Q9Y3Q0 740 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 MAP4K5Q9Y4K4 846 aa13.77□□□□□ -0.21
SQSTM1-205ENST00000464493 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 SGK494L7N484 410 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 PLIN3O60664 434 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 KLHL18O94889 574 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 CLDN9O95484 217 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 PROCP04070 461 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 ITGB2P05107 769 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 ZNF888P0CJ79 500 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 MYL2P10916 166 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 PCNAP12004 261 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 IMPDH1P20839 514 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 HPDP32754 393 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 CCNG1P51959 295 aa13.76□□□□□ -0.21
SQSTM1-205ENST00000464493 FOXL2P58012 376 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms