RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TM4SF19Q96DZ7 209 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 MOCOSQ96EN8 888 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 MMABQ96EY8 250 aaPredicted RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 AIF1LQ9BQI0 150 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 DRC3Q9H069 523 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 SOX17Q9H6I2 414 aaPredicted RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 TMBIM4Q9HC24 238 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 DNAJC11Q9NVH1 559 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 XPR1Q9UBH6 696 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 SMG1Q96Q15 3661 aaKnown RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 NDUFS4O43181 175 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 CCNT2O60583 730 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 H2AFYO75367 372 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 DNAJB5O75953 348 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 UMODP07911 640 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 SBK3P0C264 359 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 C1GALT1C1LP0DN25 315 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 SCTRP47872 440 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 AGTR2P50052 363 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 ALDH18A1P54886 795 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 REEP5Q00765 189 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 OCA2Q04671 838 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 KCNAB2Q13303 367 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 ATP1A4Q13733 1029 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 CPZQ66K79 652 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 METTL2BQ6P1Q9 378 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 SLCO4C1Q6ZQN7 724 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 EXOC3L1Q86VI1 746 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 RAB43Q86YS6 212 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 OR9A4Q8NGU2 314 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 APOPT1Q96IL0 206 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 TRIM55Q9BYV6 548 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 CD244Q9BZW8 370 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 SLC26A1Q9H2B4 701 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 GEMIN8Q9NWZ8 242 aaKnown RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 TRPC4Q9UBN4 977 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 ZNF282Q9UDV7 671 aaPredicted RBP16.18■□□□□ 0.18
VPS52-215ENST00000464425 ASB1Q9Y576 335 aa16.18■□□□□ 0.18
VPS52-215ENST00000464425 SLC35G6P0C7Q6 338 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 TAC1P20366 129 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 AVPR1BP47901 424 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 MAT1AQ00266 395 aaKnown RBP16.17■□□□□ 0.18
VPS52-215ENST00000464425 DSG2Q14126 1118 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 FAM53BQ14153 422 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 SETDB1Q15047 1291 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 SYT16Q17RD7 645 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 VWA2Q5GFL6 755 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 ATG9BQ674R7 924 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 PRSS41Q7RTY9 318 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 AMER3Q8N944 861 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 ANKRD53Q8N9V6 530 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 STT3BQ8TCJ2 826 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 UBTD2Q8WUN7 234 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 MVB12AQ96EY5 273 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 SPSB2Q99619 263 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 SARGQ9BW04 601 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 CAPS2Q9BXY5 557 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 WDR54Q9H977 334 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 CPSF2Q9P2I0 782 aaKnown RBP16.17■□□□□ 0.18
VPS52-215ENST00000464425 ZFP69BQ9UJL9 534 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 EMCNQ9ULC0 261 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 PLLPQ9Y342 182 aa16.17■□□□□ 0.18
VPS52-215ENST00000464425 TNPO3Q9Y5L0 923 aaKnown RBP16.17■□□□□ 0.18
VPS52-215ENST00000464425 VSTM2BA6NLU5 285 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 STX16-NPEPL1H3BU86 382 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 SGK494L7N484 410 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 STX16O14662 325 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 CLGNO14967 610 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PRPF4O43172 522 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS52-215ENST00000464425 TYROBPO43914 113 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PLIN3O60664 434 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PRAMEF4O60810 478 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 SMIM24O75264 130 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 C1QL1O75973 258 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PROCP04070 461 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 ZGLP1P0C6A0 271 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 GFAPP14136 432 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 IL1RNP18510 177 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 CXCR2P25025 360 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 HNF4AP41235 474 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 CCL11P51671 97 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PWP1Q13610 501 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 SLBPQ14493 270 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS52-215ENST00000464425 PCBP2Q15366 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS52-215ENST00000464425 PDK4Q16654 411 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PFKFB4Q16877 469 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 XKR6Q5GH73 641 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PRAMEF9Q5VWM5 478 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 PPP1R32Q7Z5V6 425 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 MRGPREQ86SM8 312 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 RDH11Q8TC12 318 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 MIEF2Q96C03 454 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 SH3GL2Q99962 352 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 IQCGQ9H095 443 aaKnown RBP16.16■□□□□ 0.18
VPS52-215ENST00000464425 ING2Q9H160 280 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 ADNPQ9H2P0 1102 aa16.16■□□□□ 0.18
VPS52-215ENST00000464425 GPRC5BQ9NZH0 403 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms