RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 COMMD6Q7Z4G1 85 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ERI1Q8IV48 349 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 METTL4Q8N3J2 472 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 SLC44A3Q8N4M1 653 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ZNF740Q8NDX6 193 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 COQ8BQ96D53 544 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 AURKBQ96GD4 344 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 AIF1LQ9BQI0 150 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ACAT2Q9BWD1 397 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 UGT2B28Q9BY64 529 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 OR51B5Q9H339 312 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 WASH6PQ9NQA3 447 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 BTNL2Q9UIR0 455 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 GPSM3Q9Y4H4 160 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 GABRR3A8MPY1 467 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 TRMUO75648 421 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 LAMP1P11279 417 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 TTKP33981 857 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM98BQ52LJ0 330 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM124AQ86V42 546 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 VPS37AQ8NEZ2 397 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 MRGPRX1Q96LB2 322 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 RNF145Q96MT1 663 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 CAMK1GQ96NX5 476 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 RHBGQ9H310 441 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 ATP6V1HQ9UI12 483 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 ZNF639Q9UID6 485 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM149AA5PLN7 773 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 DLGAP1O14490 977 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 LDLRP01130 860 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 RAP2AP10114 183 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 KIAA1024LP59773 190 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 CHRNB3Q05901 458 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 LRRC74AQ0VAA2 488 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 MLF2Q15773 248 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 DENND6BQ8NEG7 585 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 ABHD11Q8NFV4 315 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 SNX19Q92543 992 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 POP5Q969H6 163 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM162AQ96A26 154 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 REXO5Q96IC2 774 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 CHID1Q9BWS9 393 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 KCNK12Q9HB15 430 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 BTBD3Q9Y2F9 522 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 PLEKHM1Q9Y4G2 1056 aa20.86■□□□□ 0.93
PDLIM2-216ENST00000464275 MYOCOSA0A1B0GUC4 107 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 A0A1W2PPV9 198 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 EPN2O95208 641 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 CPSF4O95639 269 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 POU3F3P20264 500 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 RPL3P39023 403 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 CCR8P51685 355 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 TTC33Q6PID6 262 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 KIAA1324Q6UXG2 1013 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 ARHGAP22Q7Z5H3 698 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 VN1R5Q7Z5H4 357 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 RPLP0P6Q8NHW5 317 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 MYOCQ99972 504 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 BDH2Q9BUT1 245 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 RAB11FIP5Q9BXF6 653 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 PITHD1Q9GZP4 211 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 REEP4Q9H6H4 257 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 NT5DC2Q9H857 520 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 SMPD3Q9NY59 655 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 V9GYQ6 96 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 CLIC1O00299 241 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 LATO43561 262 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 RETP07949 1114 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 SERPINB1P30740 379 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 FBXO43Q4G163 708 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 COL13A1Q5TAT6 717 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 ANKRD26P1Q6NSI1 321 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 ZNF621Q6ZSS3 439 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 R3HCC1LQ7Z5L2 792 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 SERPINA11Q86U17 422 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 WDR48Q8TAF3 677 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 NRTNQ99748 197 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 MVB12BQ9H7P6 319 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 MYNNQ9NPC7 610 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 IMP3Q9NV31 184 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 LIMD1Q9UGP4 676 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 OAZ3Q9UMX2 235 aa20.85■□□□□ 0.93
PDLIM2-216ENST00000464275 ANKDD1BA6NHY2 528 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 ACOX3O15254 700 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 CREG1O75629 220 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 GLULP15104 373 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 SLC5A2P31639 672 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 CAPGP40121 348 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 REEP5Q00765 189 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 CLCA4Q14CN2 919 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 UAP1L1Q3KQV9 507 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 ISLR2Q6UXK2 745 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 TRIM69Q86WT6 500 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 CLECL1Q8IZS7 167 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 OR4K1Q8NGD4 311 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 C16orf78Q8WTQ4 265 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 PHF12Q96QT6 1004 aa20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 BHLHE41Q9C0J9 482 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-216ENST00000464275 CUEDC1Q9NWM3 386 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms