RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ANGPTL3Q9Y5C1 460 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TLDC2A0PJX2 215 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FEZF1A0PJY2 475 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SMIM23A6NLE4 172 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 K7EPI3 171 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LCMT2O60294 686 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GSTA1P08263 222 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NUDT17P0C025 328 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLC35G6P0C7Q6 338 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MTHFD2P13995 350 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EPB42P16452 691 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TAC1P20366 129 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 AHRP35869 848 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLCO1A2P46721 670 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GCGRP47871 477 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MLLT10P55197 1068 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FAM53BQ14153 422 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 UBAP2LQ14157 1087 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 VWA5B1Q5TIE3 1220 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 IRAK1BP1Q5VVH5 260 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ATG9BQ674R7 924 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLCO4C1Q6ZQN7 724 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MRGPREQ86SM8 312 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ASPGQ86U10 573 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TRPV3Q8NET8 790 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 COL26A1Q96A83 441 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ESAMQ96AP7 390 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FKBP10Q96AY3 582 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MRPL46Q9H2W6 279 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 WDR54Q9H977 334 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ZNF358Q9NW07 568 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PLAAQ9Y263 795 aa12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RUVBL1Q9Y265 456 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-207ENST00000461009 URADA6NGE7 173 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 KLK8O60259 260 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ERLIN1O75477 346 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ONECUT2O95948 504 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PDGFAP04085 211 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PYGBP11216 843 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 BCL6P41182 706 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SCTRP47872 440 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCT5P48643 541 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PIK3CGP48736 1102 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 REEP5Q00765 189 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MEF2AQ02078 507 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 IRF8Q02556 426 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 RGS1Q08116 209 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PWP1Q13610 501 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SETDB1Q15047 1291 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FBXO48Q5FWF7 155 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PAGE2BQ5JRK9 111 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 COLEC12Q5KU26 742 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 DCAF10Q5QP82 559 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MRPL14Q6P1L8 145 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 OVCH1Q7RTY7 1134 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MREGQ8N565 214 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CPT1CQ8TCG5 803 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 UBE2E3Q969T4 207 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TM4SF19Q96DZ7 209 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PTCD3Q96EY7 689 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SEC16BQ96JE7 1060 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 EFCAB11Q9BUY7 163 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NT5DC2Q9H857 520 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ATP13A2Q9NQ11 1180 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZFP69BQ9UJL9 534 aa12.58□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FER1L5A0AVI2 2057 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GOLGA8RI6L899 631 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AGPSO00116 658 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SERPIND1P05546 499 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GSTM2P28161 218 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 HPDP32754 393 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CASP2P42575 452 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AVPR1BP47901 424 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CD97P48960 835 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AGTR2P50052 363 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SKP1P63208 163 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 OCA2Q04671 838 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AIMP2Q13155 320 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CHIT1Q13231 466 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PCBP2Q15366 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TBCCQ15814 346 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 HKDC1Q2TB90 917 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NADK2Q4G0N4 442 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TMIGD1Q6UXZ0 262 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GALNT16Q8N428 558 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms