RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TRIM31Q9BZY9 425 aa14.88□□□□□ -0.03
CHCHD3-204ENST00000457942 ZFATQ9P243 1243 aa14.88□□□□□ -0.03
CHCHD3-204ENST00000457942 CORO1CQ9ULV4 474 aaPredicted RBP14.88□□□□□ -0.03
CHCHD3-204ENST00000457942 ZFHX3Q15911 3703 aa14.88□□□□□ -0.03
CHCHD3-204ENST00000457942 SCN2AQ99250 2005 aa14.88□□□□□ -0.03
CHCHD3-204ENST00000457942 A8MUI8 341 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 OR1F1O43749 312 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 DIAPH2O60879 1101 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 CDC123O75794 336 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 WDPCPO95876 746 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 TNFSF10P50591 281 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 PGGT1BP53609 377 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 AP1S2P56377 157 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 KCNK10P57789 538 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 GNG11P61952 73 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 SNRPNP63162 240 aaKnown RBP14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 DUPD1Q68J44 220 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 TRMT10BQ6PF06 316 aaKnown RBP14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 CPEB2Q7Z5Q1 589 aaKnown RBP14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 GALNT7Q86SF2 657 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 ANKMY2Q8IV38 441 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 MFSD9Q8NBP5 474 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 ATL1Q8WXF7 558 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 FAM129AQ9BZQ8 928 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 VWA7Q9Y334 891 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 NAALAD2Q9Y3Q0 740 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 DYRK1BQ9Y463 629 aa14.87□□□□□ -0.03
CHCHD3-204ENST00000457942 LCMT2O60294 686 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 TSPAN12O95859 305 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 CYC1P08574 325 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 EFNA3P52797 238 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 ITGA8P53708 1063 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 SKP1P63208 163 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 ACTN3Q08043 901 aaPredicted RBP14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 RGS1Q08116 209 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 CSHL1Q14406 222 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 HERC3Q15034 1050 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 INAQ16352 499 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 RPUSD3Q6P087 351 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 HAS2Q92819 552 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 SNF8Q96H20 258 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 PEX11GQ96HA9 241 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 TSNARE1Q96NA8 513 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 CYTH2Q99418 400 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 OLFM1Q99784 485 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 EGFL8Q99944 293 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 RUBCNLQ9H714 662 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 KCNK13Q9HB14 408 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 SH3BGRL2Q9UJC5 107 aa14.86□□□□□ -0.03
CHCHD3-204ENST00000457942 CCDC168Q8NDH2 2452 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 POLEQ07864 2286 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 OR5H15A6NDH6 313 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 OR2W5A6NFC9 320 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 TTI1O43156 1089 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 ENO2P09104 434 aaPredicted RBP14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 MYBL2P10244 700 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 NPPBP16860 134 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 IVDP26440 423 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 PAFAH1B1P43034 410 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 AGTR2P50052 363 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SRSF11Q05519 484 aaKnown RBP14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 PDIA2Q13087 525 aaKnown RBP14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 FRA10AC1Q70Z53 315 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 ANKRD37Q7Z713 158 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 PDSS2Q86YH6 399 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SHISA5Q8N114 240 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 AMER2Q8N7J2 671 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 OR56A3Q8NH54 315 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SLC5A11Q8WWX8 675 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 FBXL8Q96CD0 374 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 LRRC39Q96DD0 335 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 TM4SF19Q96DZ7 209 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 IMMP1LQ96LU5 166 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 NAPGQ99747 312 aaPredicted RBP14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SLX1AQ9BQ83 275 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 STMN3Q9NZ72 180 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 ABI3Q9P2A4 366 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SLC22A7Q9Y694 548 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 SAR1BQ9Y6B6 198 aa14.85□□□□□ -0.03
CHCHD3-204ENST00000457942 FAM95CA0A1B0GW59 222 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 TRBC2A0A5B9 178 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 NPEPPSL1A6NEC2 478 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 EFCAB8A8MWE9 144 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 SEC31AO94979 1220 aaKnown RBP14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 RASAL1O95294 804 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 OLR1P78380 273 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 MGAT5Q09328 741 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 ABRAXAS2Q15018 415 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 NSDHLQ15738 373 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 EXT1Q16394 746 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 DEFB134Q4QY38 66 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 CATSPEREQ5SY80 951 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 STEAP4Q687X5 459 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 FCRLBQ6BAA4 426 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 PLAG1Q6DJT9 500 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 CAPN12Q6ZSI9 719 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 ABHD13Q7L211 337 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 STRA8Q7Z7C7 330 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 TMPRSS11BQ86T26 416 aa14.84□□□□□ -0.03
CHCHD3-204ENST00000457942 ZNF740Q8NDX6 193 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms