RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 IPPKQ9H8X2 491 aa9.57□□□□□ -0.88
ATG4A-206ENST00000457035 IL17BQ9UHF5 180 aa9.57□□□□□ -0.88
ATG4A-206ENST00000457035 CROTQ9UKG9 612 aa9.57□□□□□ -0.88
ATG4A-206ENST00000457035 PCTPQ9UKL6 214 aa9.57□□□□□ -0.88
ATG4A-206ENST00000457035 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 A0A1B0GX78 115 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 PPP6CO00743 305 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 OR7A17O14581 309 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TYROBPO43914 113 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SPAG7O75391 227 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 KATNA1O75449 491 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZIC2O95409 532 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TBX6O95947 436 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SMIM10L1P0DMW3 83 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 LIFP15018 202 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 AGXTP21549 392 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 DLSTP36957 453 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 CDH13P55290 713 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 HERVK_113P63132 956 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 LAPTM5Q13571 262 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 NKAIN1Q4KMZ8 207 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZNF678Q5SXM1 525 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 LIPJQ5W064 366 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZYG11AQ6WRX3 759 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 RPS27LQ71UM5 84 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 VN1R5Q7Z5H4 357 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 CROCCP2Q86T23 111 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SLC22A9Q8IVM8 553 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 LAS2Q8IYD9 372 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 KRT78Q8N1N4 520 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TBC1D19Q8N5T2 526 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 L3MBTL4Q8NA19 623 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TRPV3Q8NET8 790 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 NT5CQ8TCD5 201 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TCP10LQ8TDR4 215 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 PGM2Q96G03 612 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SMIM10Q96HG1 83 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 APOPT1Q96IL0 206 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SLC45A3Q96JT2 553 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 UBL7Q96S82 380 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 EFCAB11Q9BUY7 163 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 REPIN1Q9BWE0 567 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ERVK-6Q9BXR3 956 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 GPR87Q9BY21 358 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 AICDAQ9GZX7 198 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 RHBGQ9H310 441 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 NOL11Q9H8H0 719 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ACSS2Q9NR19 701 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 TXLNGQ9NUQ3 528 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 SENP1Q9P0U3 644 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ZNF225Q9UK10 706 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 FARSAQ9Y285 508 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 MRPS2Q9Y399 296 aaKnown RBP9.56□□□□□ -0.88
ATG4A-206ENST00000457035 ANGPTL3Q9Y5C1 460 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 PCDHGA6Q9Y5G7 932 aa9.56□□□□□ -0.88
ATG4A-206ENST00000457035 C21orf140B9A014 251 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 AGPSO00116 658 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 NDUFS4O43181 175 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 UGDHO60701 494 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SERPINA6P08185 405 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 RAB40ALP0C0E4 278 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 MYL2P10916 166 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 CPA3P15088 417 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 PTPN4P29074 926 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 HNF4AP41235 474 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 OR1D4P47884 311 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 PIK3CGP48736 1102 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 DNAJB13P59910 316 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 CLCQ05315 142 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 TRAF3Q13114 568 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 DNASE1L3Q13609 305 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 HIST2H2ACQ16777 129 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 PAGE2BQ5JRK9 111 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 HIST2H2AA3Q6FI13 130 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 ADNP2Q6IQ32 1131 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 GRHL2Q6ISB3 625 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 MRPL14Q6P1L8 145 aaKnown RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 PRMT9Q6P2P2 845 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 FAM198BQ6UWH4 519 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 COX15Q7KZN9 410 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 OVCH1Q7RTY7 1134 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 AFAP1L2Q8N4X5 818 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 TTLQ8NG68 377 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 OR7G3Q8NG95 312 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 OR52B6Q8NGF0 335 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 RDH11Q8TC12 318 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SNRNP27Q8WVK2 155 aaKnown RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 CCDC126Q96EE4 140 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 L3HYPDHQ96EM0 354 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 MVB12AQ96EY5 273 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 TMEM237Q96Q45 408 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SMC6Q96SB8 1091 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms